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1934  structures 9841  species 0  interactions 231731  sequences 5627  architectures

Clan: Peptidase_CA (CL0125)

Summary

Domain organisation

Below is a listing of the unique domain organisations or architectures from this clan. More...

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Alignments

The table below shows the number of occurrences of each domain throughout the sequence database. More...

Pfam family Num. domains Alignment
UCH (PF00443) 49226 (21.2%) View
Transglut_core (PF01841) 24853 (10.7%) View
NLPC_P60 (PF00877) 22006 (9.5%) View
Peptidase_C1 (PF00112) 21918 (9.5%) View
Peptidase_C48 (PF02902) 18577 (8.0%) View
Peptidase_C2 (PF00648) 11594 (5.0%) View
OTU (PF02338) 9683 (4.2%) View
Peptidase_C12 (PF01088) 5825 (2.5%) View
Peptidase_C39 (PF03412) 5212 (2.2%) View
Peptidase_C97 (PF05903) 4831 (2.1%) View
CHAP (PF05257) 4189 (1.8%) View
LRAT (PF04970) 3964 (1.7%) View
Peptidase_C39_2 (PF13529) 3672 (1.6%) View
Acetyltransf_2 (PF00797) 3666 (1.6%) View
Transglut_core2 (PF13369) 3225 (1.4%) View
Peptidase_C54 (PF03416) 3223 (1.4%) View
Peptidase_C1_2 (PF03051) 3161 (1.4%) View
EDR1 (PF14381) 3045 (1.3%) View
Peptidase_C65 (PF10275) 2790 (1.2%) View
Rad4 (PF03835) 2705 (1.2%) View
Josephin (PF02099) 2687 (1.2%) View
Peptidase_C78 (PF07910) 2411 (1.0%) View
UCH_1 (PF13423) 1749 (0.8%) View
Peptidase_C93 (PF06035) 1634 (0.7%) View
Peptidase_C92 (PF05708) 1386 (0.6%) View
Amidase_6 (PF12671) 1372 (0.6%) View
Transglut_core3 (PF13471) 1196 (0.5%) View
Phytochelatin (PF05023) 1106 (0.5%) View
Nt_Gln_amidase (PF09764) 973 (0.4%) View
Guanylate_cyc_2 (PF09778) 872 (0.4%) View
BtrH_N (PF14399) 838 (0.4%) View
Menin (PF05053) 807 (0.3%) View
Vasohibin (PF14822) 798 (0.3%) View
Peptidase_C70 (PF12385) 736 (0.3%) View
Peptidase_C101 (PF16218) 557 (0.2%) View
DUF1287 (PF06940) 533 (0.2%) View
Peptidase_C10 (PF01640) 528 (0.2%) View
DUF1460 (PF07313) 511 (0.2%) View
continued
Pfam family Num. domains Alignment
TGase_elicitor (PF16683) 401 (0.2%) View
DUF3335 (PF11814) 374 (0.2%) View
TGL (PF20085) 359 (0.2%) View
Amidase_5 (PF05382) 340 (0.1%) View
Peptidase_C98 (PF15499) 329 (0.1%) View
Tae4 (PF14113) 299 (0.1%) View
DUF2272 (PF10030) 252 (0.1%) View
Herpes_teg_N (PF04843) 238 (0.1%) View
CoV_peptidase (PF08715) 149 (0.1%) View
Peptidase_C58 (PF03543) 135 (0.1%) View
DUF1175 (PF06672) 130 (0.1%) View
Gln_deamidase_2 (PF18626) 122 (0.1%) View
DUF553 (PF04473) 79 (0.0%) View
Peptidase_C5 (PF00770) 70 (0.0%) View
Mac-1 (PF09028) 66 (0.0%) View
Peptidase_C23 (PF05379) 53 (0.0%) View
DUF2026 (PF09641) 40 (0.0%) View
Tox-PLDMTX (PF15645) 37 (0.0%) View
Peptidase_C32 (PF05411) 28 (0.0%) View
Peptidase_C33 (PF05412) 24 (0.0%) View
Peptidase_C42 (PF05533) 20 (0.0%) View
Peptidase_C16 (PF01831) 19 (0.0%) View
Transglut_prok (PF09017) 18 (0.0%) View
Peptidase_C47 (PF05543) 14 (0.0%) View
Peptidase_C71 (PF12386) 12 (0.0%) View
CIF (PF16374) 9 (0.0%) View
Peptidase_C31 (PF05410) 9 (0.0%) View
Peptidase_C6 (PF00851) 9 (0.0%) View
Peptidase_C21 (PF05381) 7 (0.0%) View
SidE_DUB (PF19049) 6 (0.0%) View
Peptidase_C7 (PF01830) 5 (0.0%) View
Peptidase_C36 (PF05415) 4 (0.0%) View
Peptidase_C34 (PF05413) 4 (0.0%) View
Peptidase_C27 (PF05407) 4 (0.0%) View
Peptidase_C9 (PF01707) 3 (0.0%) View
Peptidase_C8 (PF03569) 3 (0.0%) View
Peptidase_C28 (PF05408) 1 (0.0%) View
Total: 75 Total: 231731
No alignment ℹ
 

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Family relationships

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Species distribution

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Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between the Pfam families in this clan, the corresponding UniProt entries, and the region of the three-dimensional structures that are available for that sequence.

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