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990  structures 5646  species 0  interactions 214446  sequences 2164  architectures

Clan: MBB (CL0193)

Summary

Domain organisation

Below is a listing of the unique domain organisations or architectures from this clan. More...

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Alignments

The table below shows the number of occurrences of each domain throughout the sequence database. More...

Pfam family Num. domains Alignment
TonB_dep_Rec (PF00593) 83833 (39.1%) View
Omp85 (PF01103) 13422 (6.3%) View
OMP_b-brl (PF13505) 11021 (5.1%) View
OMP_b-brl_3 (PF14905) 7389 (3.4%) View
Porin_4 (PF13609) 7137 (3.3%) View
Porin_3 (PF01459) 6725 (3.1%) View
OMP_b-brl_2 (PF13568) 6629 (3.1%) View
Autotransporter (PF03797) 5268 (2.5%) View
PorP_SprF (PF11751) 4478 (2.1%) View
Toluene_X (PF03349) 3708 (1.7%) View
ShlB (PF03865) 2946 (1.4%) View
LptD (PF04453) 2895 (1.3%) View
Porin_O_P (PF07396) 2822 (1.3%) View
OprB (PF04966) 2820 (1.3%) View
Phenol_MetA_deg (PF13557) 2524 (1.2%) View
MipA (PF06629) 2319 (1.1%) View
OmpW (PF03922) 2137 (1.0%) View
DUF481 (PF04338) 2112 (1.0%) View
Gcw_chp (PF09694) 1923 (0.9%) View
Alginate_exp (PF13372) 1921 (0.9%) View
PagL (PF09411) 1912 (0.9%) View
Usher (PF00577) 1786 (0.8%) View
DUF2490 (PF10677) 1577 (0.7%) View
DUF5916 (PF19313) 1405 (0.7%) View
BBP2 (PF07642) 1389 (0.6%) View
YadA_anchor (PF03895) 1337 (0.6%) View
LptD_2 (PF19838) 1320 (0.6%) View
PLA1 (PF02253) 1273 (0.6%) View
OprD (PF03573) 1271 (0.6%) View
DUF3078 (PF11276) 1251 (0.6%) View
MDM10 (PF12519) 1218 (0.6%) View
CopB (PF05275) 1198 (0.6%) View
BBP2_2 (PF10082) 1161 (0.5%) View
PorV (PF19572) 1076 (0.5%) View
DUF3575 (PF12099) 1068 (0.5%) View
DUF2219 (PF09982) 1061 (0.5%) View
DUF6089 (PF19573) 1047 (0.5%) View
YjbH (PF06082) 983 (0.5%) View
Caps_assemb_Wzi (PF14052) 971 (0.5%) View
Porin_2 (PF02530) 951 (0.4%) View
Porin_10 (PF14121) 870 (0.4%) View
LamB (PF02264) 810 (0.4%) View
DcaP (PF19577) 716 (0.3%) View
OmpA_membrane (PF01389) 704 (0.3%) View
SlipAM (PF04575) 656 (0.3%) View
Porin_1 (PF00267) 633 (0.3%) View
DUF6268 (PF19783) 586 (0.3%) View
MSP (PF01716) 553 (0.3%) View
DUF5777 (PF19089) 549 (0.3%) View
Omp85_2 (PF19143) 533 (0.2%) View
DUF6048 (PF19515) 521 (0.2%) View
continued
Pfam family Num. domains Alignment
Channel_Tsx (PF03502) 511 (0.2%) View
BCSC_C (PF05420) 499 (0.2%) View
IAT_beta (PF11924) 493 (0.2%) View
TbpB_B_D (PF01298) 432 (0.2%) View
Porin_5 (PF16930) 430 (0.2%) View
DUF4421 (PF14391) 398 (0.2%) View
TraF_2 (PF13729) 385 (0.2%) View
YaiO (PF19413) 363 (0.2%) View
BBP7 (PF07585) 345 (0.2%) View
YfaZ (PF07437) 336 (0.2%) View
Legionella_OMP (PF05150) 335 (0.2%) View
HP_OMP (PF01856) 309 (0.1%) View
KdgM (PF06178) 254 (0.1%) View
PagP (PF07017) 245 (0.1%) View
Surface_Ag_2 (PF01617) 222 (0.1%) View
Omptin (PF01278) 190 (0.1%) View
MtrB_PioB (PF11854) 187 (0.1%) View
DUF5020 (PF16412) 181 (0.1%) View
Porin_7 (PF16956) 157 (0.1%) View
DUF3187 (PF11383) 157 (0.1%) View
DUF2860 (PF11059) 146 (0.1%) View
DUF3373 (PF11853) 144 (0.1%) View
Ail_Lom (PF06316) 135 (0.1%) View
Porin_8 (PF16966) 116 (0.1%) View
OprF (PF05736) 107 (0.0%) View
HP_OMP_2 (PF02521) 107 (0.0%) View
DUF3138 (PF11336) 103 (0.0%) View
Pom (PF17251) 91 (0.0%) View
DUF4595 (PF15283) 89 (0.0%) View
Opacity (PF02462) 82 (0.0%) View
UPF0164 (PF03687) 72 (0.0%) View
Campylo_MOMP (PF05538) 63 (0.0%) View
OmpA_like (PF16961) 55 (0.0%) View
Omp_AT (PF11557) 52 (0.0%) View
Lipoprot_C (PF08794) 34 (0.0%) View
DUF2715 (PF10895) 33 (0.0%) View
TbpB_C (PF17483) 27 (0.0%) View
Porin_OmpG (PF09381) 22 (0.0%) View
Usher_TcfC (PF17271) 21 (0.0%) View
Porin_OmpG_1_2 (PF16946) 18 (0.0%) View
MOSP_C (PF02722) 13 (0.0%) View
Porin_6 (PF16939) 12 (0.0%) View
Chlam_OMP (PF01308) 11 (0.0%) View
DUF3573 (PF12097) 11 (0.0%) View
HpuA (PF16960) 10 (0.0%) View
CymA (PF16941) 10 (0.0%) View
Porin_OmpL1 (PF11389) 10 (0.0%) View
OpcA (PF07239) 6 (0.0%) View
TSA (PF03249) 2 (0.0%) View
Total: 100 Total: 214446
No alignment ℹ
 

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Family relationships

This diagram shows the relationships between members of this clan. More...

Species distribution

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Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between the Pfam families in this clan, the corresponding UniProt entries, and the region of the three-dimensional structures that are available for that sequence.

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