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84  structures 6207  species 0  interactions 33402  sequences 857  architectures

Clan: PGBD (CL0244)


PGBD superfamily Add an annotation

This clan consists of small putative peptidoglycan binding domains composed of three alpha helices.

This clan contains 3 families and the total number of domains in the clan is 33402. The clan was built by A Bateman.


This clan contains the following 3 member families:

PG_binding_1 PG_binding_2 PG_binding_3

External database links

Domain organisation

Below is a listing of the unique domain organisations or architectures from this clan. More...

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The table below shows the number of occurrences of each domain throughout the sequence database. More...

Pfam family Num. domains Alignment
PG_binding_1 (PF01471) 31981 (95.7%) View
PG_binding_3 (PF09374) 1154 (3.5%) View
PG_binding_2 (PF08823) 267 (0.8%) View
Total: 3 Total: 33402 Clan alignment

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Family relationships

This diagram shows the relationships between members of this clan. More...

Species distribution

Tree controls


This tree shows the occurrence of the domains in this clan across different species. More...



For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between the Pfam families in this clan, the corresponding UniProt entries, and the region of the three-dimensional structures that are available for that sequence.

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