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4282  structures 6880  species 0  interactions 259538  sequences 14002  architectures

Clan: Concanavalin (CL0004)

Summary

Concanavalin-like lectin/glucanase superfamily Add an annotation

This superfamily includes a diverse range of carbohydrate binding domains and glycosyl hydrolase enzymes that share a common structure.

This clan contains 50 families and the total number of domains in the clan is 259538. The clan was built by A Bateman.

Members

This clan contains the following 50 member families:

Alginate_lyase2 ArabFuran-catal Arabino_trans_N Bac_rhamnosid Bact_lectin bCoV_S1_N Calreticulin Cleaved_Adhesin DUF1080 DUF1349 DUF1583 DUF1961 DUF2401 DUF3472 DUF4975 DUF6250 Exotox-A_bind Gal-bind_lectin GalBD_like GH131_N GH43_C2 Glyco_hydro_11 Glyco_hydro_12 Glyco_hydro_16 Glyco_hydro_32C Glyco_hydro_7 HA1 Laminin_G_1 Laminin_G_2 Laminin_G_3 Lectin_leg-like Lectin_legB MAM Methyltransf_FA Neuralized Pentaxin Peptidase_A4 Polysacc_lyase PRY Reoviridae_Vp9 Sial-lect-inser Sialidase SKN1_KRE6_Sbg1 SPRY TgMIC1 Toxin_R_bind_N TSP_C VP4_haemagglut XET_C YrpD

External database links

Domain organisation

Below is a listing of the unique domain organisations or architectures from this clan. More...

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Alignments

The table below shows the number of occurrences of each domain throughout the sequence database. More...

Pfam family Num. domains Alignment
Laminin_G_2 (PF02210) 43213 (16.6%) View
SPRY (PF00622) 37345 (14.4%) View
Laminin_G_3 (PF13385) 21769 (8.4%) View
Glyco_hydro_16 (PF00722) 21084 (8.1%) View
PRY (PF13765) 18699 (7.2%) View
MAM (PF00629) 15824 (6.1%) View
Laminin_G_1 (PF00054) 9523 (3.7%) View
DUF1080 (PF06439) 8576 (3.3%) View
Gal-bind_lectin (PF00337) 8550 (3.3%) View
Lectin_legB (PF00139) 8429 (3.2%) View
Glyco_hydro_32C (PF08244) 7464 (2.9%) View
Calreticulin (PF00262) 6113 (2.4%) View
GH43_C2 (PF17851) 5876 (2.3%) View
XET_C (PF06955) 5101 (2.0%) View
Neuralized (PF07177) 4904 (1.9%) View
Pentaxin (PF00354) 4224 (1.6%) View
Bac_rhamnosid (PF05592) 4100 (1.6%) View
Lectin_leg-like (PF03388) 3349 (1.3%) View
SKN1_KRE6_Sbg1 (PF03935) 2948 (1.1%) View
TSP_C (PF05735) 2687 (1.0%) View
DUF1349 (PF07081) 2367 (0.9%) View
Glyco_hydro_12 (PF01670) 2223 (0.9%) View
Glyco_hydro_11 (PF00457) 2046 (0.8%) View
Glyco_hydro_7 (PF00840) 2024 (0.8%) View
Alginate_lyase2 (PF08787) 1567 (0.6%) View
Peptidase_A4 (PF01828) 1509 (0.6%) View
continued
Pfam family Num. domains Alignment
GH131_N (PF18271) 1091 (0.4%) View
Methyltransf_FA (PF12248) 1027 (0.4%) View
Polysacc_lyase (PF14099) 902 (0.3%) View
ArabFuran-catal (PF09206) 869 (0.3%) View
Arabino_trans_N (PF17689) 664 (0.3%) View
Cleaved_Adhesin (PF07675) 619 (0.2%) View
Bact_lectin (PF18483) 613 (0.2%) View
DUF2401 (PF10287) 611 (0.2%) View
DUF3472 (PF11958) 490 (0.2%) View
GalBD_like (PF17974) 289 (0.1%) View
DUF6250 (PF19763) 245 (0.1%) View
DUF1961 (PF09224) 224 (0.1%) View
DUF1583 (PF07622) 97 (0.0%) View
DUF4975 (PF16346) 88 (0.0%) View
Sialidase (PF02973) 73 (0.0%) View
bCoV_S1_N (PF16451) 47 (0.0%) View
YrpD (PF15493) 16 (0.0%) View
Toxin_R_bind_N (PF07953) 16 (0.0%) View
Sial-lect-inser (PF09264) 15 (0.0%) View
HA1 (PF18239) 7 (0.0%) View
VP4_haemagglut (PF00426) 7 (0.0%) View
Exotox-A_bind (PF09101) 6 (0.0%) View
Reoviridae_Vp9 (PF08978) 4 (0.0%) View
TgMIC1 (PF11476) 4 (0.0%) View
Total: 50 Total: 259538
No alignment ℹ
 

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Family relationships

This diagram shows the relationships between members of this clan. More...

Species distribution

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Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between the Pfam families in this clan, the corresponding UniProt entries, and the region of the three-dimensional structures that are available for that sequence.

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