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2124  structures 9268  species 0  interactions 275930  sequences 5803  architectures

Clan: Peptidase_MA (CL0126)

Summary

Domain organisation

Below is a listing of the unique domain organisations or architectures from this clan. More...

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Alignments

The table below shows the number of occurrences of each domain throughout the sequence database. More...

Pfam family Num. domains Alignment
Peptidase_M1 (PF01433) 27464 (10.0%) View
Peptidase_M48 (PF01435) 26580 (9.6%) View
Peptidase_M41 (PF01434) 18727 (6.8%) View
Peptidase_M3 (PF01432) 17115 (6.2%) View
Peptidase_M50 (PF02163) 16953 (6.1%) View
Reprolysin (PF01421) 13086 (4.7%) View
Peptidase_M13 (PF01431) 10594 (3.8%) View
Astacin (PF01400) 10561 (3.8%) View
Peptidase_M10 (PF00413) 10501 (3.8%) View
Peptidase_M78 (PF06114) 8989 (3.3%) View
YbeY (PF02130) 8441 (3.1%) View
DUF45 (PF01863) 6829 (2.5%) View
DUF885 (PF05960) 6024 (2.2%) View
Peptidase_M56 (PF05569) 5243 (1.9%) View
SprT-like (PF10263) 4618 (1.7%) View
Zn_peptidase (PF04228) 4174 (1.5%) View
Peptidase_M4_C (PF02868) 3871 (1.4%) View
Peptidase_M4 (PF01447) 3795 (1.4%) View
Zincin_1 (PF06262) 3649 (1.3%) View
Peptidase_M43 (PF05572) 3551 (1.3%) View
Peptidase_M8 (PF01457) 3349 (1.2%) View
Peptidase_M49 (PF03571) 3105 (1.1%) View
Peptidase_M2 (PF01401) 3097 (1.1%) View
Zincin_2 (PF10103) 2749 (1.0%) View
Peptidase_M50B (PF13398) 2683 (1.0%) View
Zn_peptidase_2 (PF04298) 2544 (0.9%) View
WLM (PF08325) 2500 (0.9%) View
Reprolysin_5 (PF13688) 2473 (0.9%) View
Peptidase_M61 (PF05299) 2452 (0.9%) View
Peptidase_M32 (PF02074) 2447 (0.9%) View
Peptidase_M6 (PF05547) 2190 (0.8%) View
DUF4157 (PF13699) 2092 (0.8%) View
Peptidase_M36 (PF02128) 2073 (0.8%) View
MPTase-PolyVal (PF18818) 2042 (0.7%) View
DUF4953 (PF16313) 2003 (0.7%) View
BSP (PF04450) 1717 (0.6%) View
Peptidase_M90 (PF06167) 1667 (0.6%) View
Peptidase_M76 (PF09768) 1664 (0.6%) View
continued
Pfam family Num. domains Alignment
DUF2201_N (PF13203) 1536 (0.6%) View
DA1-like (PF12315) 1438 (0.5%) View
Peptidase_M60 (PF13402) 1380 (0.5%) View
DUF3152 (PF11350) 1226 (0.4%) View
Peptidase_Mx (PF15887) 1160 (0.4%) View
Reprolysin_4 (PF13583) 1119 (0.4%) View
Reprolysin_2 (PF13574) 1105 (0.4%) View
Peptidase_M64 (PF09471) 1040 (0.4%) View
Metallopep (PF12044) 962 (0.3%) View
Aspzincin_M35 (PF14521) 937 (0.3%) View
DUF3267 (PF11667) 894 (0.3%) View
Peptidase_M54 (PF07998) 875 (0.3%) View
DUF3810 (PF12725) 863 (0.3%) View
DUF2268 (PF10026) 836 (0.3%) View
Peptidase_M35 (PF02102) 802 (0.3%) View
Reprolysin_3 (PF13582) 606 (0.2%) View
Peptidase_M7 (PF02031) 585 (0.2%) View
Peptidase_M9 (PF01752) 554 (0.2%) View
Peptidase_M57 (PF12388) 510 (0.2%) View
DUF4344 (PF14247) 506 (0.2%) View
Aminopep (PF10023) 500 (0.2%) View
Peptidase_M11 (PF05548) 459 (0.2%) View
Peptidase_Mx1 (PF15890) 412 (0.1%) View
HRXXH (PF13933) 410 (0.1%) View
DUF1570 (PF07607) 347 (0.1%) View
Peptidase_MA_2 (PF13485) 287 (0.1%) View
Peptidase_M91 (PF14891) 247 (0.1%) View
PhageMetallopep (PF18894) 241 (0.1%) View
Peptidase_M66 (PF10462) 201 (0.1%) View
DUF5700 (PF18958) 103 (0.0%) View
Peptidase_M30 (PF10460) 63 (0.0%) View
Peptidase_U49 (PF10463) 51 (0.0%) View
ATLF (PF07737) 28 (0.0%) View
Peptidase_M27 (PF01742) 14 (0.0%) View
DUF3920 (PF13058) 11 (0.0%) View
Peptidase_M85 (PF13678) 10 (0.0%) View
Total: 74 Total: 275930
No alignment ℹ
 

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Family relationships

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Species distribution

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Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between the Pfam families in this clan, the corresponding UniProt entries, and the region of the three-dimensional structures that are available for that sequence.

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