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4460  structures 9844  species 0  interactions 382227  sequences 4749  architectures

Clan: Zn_Beta_Ribbon (CL0167)

Summary

Domain organisation

Below is a listing of the unique domain organisations or architectures from this clan. More...

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Alignments

The table below shows the number of occurrences of each domain throughout the sequence database. More...

Pfam family Num. domains Alignment
LIM (PF00412) 82108 (21.5%) View
zf-C4 (PF00105) 25356 (6.6%) View
zf-RanBP (PF00641) 19840 (5.2%) View
GATA (PF00320) 19707 (5.2%) View
zf-C4_Topoisom (PF01396) 13360 (3.5%) View
zf-FPG_IleRS (PF06827) 11159 (2.9%) View
OrfB_Zn_ribbon (PF07282) 10640 (2.8%) View
zf-CHC2 (PF01807) 9712 (2.5%) View
Ribosomal_L33 (PF00471) 9634 (2.5%) View
zf-dskA_traR (PF01258) 9516 (2.5%) View
Ribosomal_L32p (PF01783) 9023 (2.4%) View
Rubredoxin_2 (PF18073) 8318 (2.2%) View
zf-C4_ClpX (PF06689) 7952 (2.1%) View
Zn_ribbon_recom (PF13408) 7844 (2.1%) View
zf-GRF (PF06839) 7547 (2.0%) View
RecO_C (PF02565) 7195 (1.9%) View
TFIIS_C (PF01096) 6802 (1.8%) View
MscL (PF01741) 6605 (1.7%) View
Trm112p (PF03966) 5641 (1.5%) View
PriA_CRR (PF18319) 5587 (1.5%) View
DUF35_N (PF12172) 4570 (1.2%) View
zinc_ribbon_2 (PF13240) 4478 (1.2%) View
Zn-ribbon_8 (PF09723) 4452 (1.2%) View
zf-NADH-PPase (PF09297) 4359 (1.1%) View
TF_Zn_Ribbon (PF08271) 4293 (1.1%) View
zf-ZPR1 (PF03367) 3602 (0.9%) View
zf-PARP (PF00645) 3222 (0.8%) View
DZR (PF12773) 3217 (0.8%) View
RNA_POL_M_15KD (PF02150) 2891 (0.8%) View
Ribosomal_S27e (PF01667) 2772 (0.7%) View
zf-CSL (PF05207) 2741 (0.7%) View
zf-ISL3 (PF14690) 2639 (0.7%) View
Ribosomal_L37ae (PF01780) 2501 (0.7%) View
Ribosomal_L44 (PF00935) 2465 (0.6%) View
DZR_2 (PF18912) 2381 (0.6%) View
zinc_ribbon_9 (PF14369) 2299 (0.6%) View
zf-RING_7 (PF02591) 2228 (0.6%) View
zf-TFIIB (PF13453) 2167 (0.6%) View
Ribosomal_L37e (PF01907) 2162 (0.6%) View
Ribosomal_S27 (PF01599) 2049 (0.5%) View
YjdM_Zn_Ribbon (PF08274) 1919 (0.5%) View
Toprim_Crpt (PF13342) 1900 (0.5%) View
Ribosomal_L40e (PF01020) 1890 (0.5%) View
Spt4 (PF06093) 1852 (0.5%) View
Elf1 (PF05129) 1822 (0.5%) View
continued
Pfam family Num. domains Alignment
zinc_ribbon_10 (PF10058) 1708 (0.4%) View
NOB1_Zn_bind (PF08772) 1559 (0.4%) View
DUF4379 (PF14311) 1558 (0.4%) View
Zn_Tnp_IS1595 (PF12760) 1540 (0.4%) View
Nudix_N_2 (PF14803) 1508 (0.4%) View
DNA_RNApol_7kD (PF03604) 1477 (0.4%) View
zinc_ribbon_4 (PF13717) 1307 (0.3%) View
Topo_Zn_Ribbon (PF08272) 1298 (0.3%) View
Zn_ribbon_SprT (PF17283) 1179 (0.3%) View
Auto_anti-p27 (PF06677) 1101 (0.3%) View
zinc_ribbon_12 (PF11331) 1017 (0.3%) View
zinc-ribbon_6 (PF10005) 1012 (0.3%) View
zf-trcl (PF13451) 963 (0.3%) View
zinc_ribbon_15 (PF17032) 920 (0.2%) View
DUF3945 (PF13101) 810 (0.2%) View
zf-RRN7 (PF11781) 757 (0.2%) View
zf-ribbon_3 (PF13248) 639 (0.2%) View
zinc_ribbon_5 (PF13719) 584 (0.2%) View
DUF1451 (PF07295) 561 (0.1%) View
DUF2387 (PF09526) 559 (0.1%) View
Prim_Zn_Ribbon (PF08273) 513 (0.1%) View
Zn_Tnp_IS1 (PF03811) 496 (0.1%) View
Stc1 (PF12898) 482 (0.1%) View
zinc_ribbon_13 (PF09855) 480 (0.1%) View
DUF2614 (PF11023) 452 (0.1%) View
UPF0547 (PF10571) 422 (0.1%) View
Ogr_Delta (PF04606) 401 (0.1%) View
Tnp_zf-ribbon_2 (PF13842) 335 (0.1%) View
zf_PR_Knuckle (PF18445) 289 (0.1%) View
CpXC (PF14353) 281 (0.1%) View
Lar_restr_allev (PF14354) 257 (0.1%) View
DUF2072 (PF09845) 240 (0.1%) View
HVO_2753_ZBP (PF07754) 223 (0.1%) View
zinc-ribbons_6 (PF07191) 173 (0.0%) View
DUF2116 (PF09889) 138 (0.0%) View
DUF2180 (PF09947) 131 (0.0%) View
Mu-like_Com (PF10122) 125 (0.0%) View
A2L_zn_ribbon (PF08792) 99 (0.0%) View
zf_Rg (PF17915) 90 (0.0%) View
NinF (PF05810) 72 (0.0%) View
zinc_ribbon_11 (PF11682) 26 (0.0%) View
Baculo_LEF5_C (PF11792) 24 (0.0%) View
DUF1936 (PF09151) 4 (0.0%) View
Total: 88 Total: 382227
No alignment ℹ
 

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Family relationships

This diagram shows the relationships between members of this clan. More...

Species distribution

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Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between the Pfam families in this clan, the corresponding UniProt entries, and the region of the three-dimensional structures that are available for that sequence.

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