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0  structures 422  species 0  interactions 7513  sequences 173  architectures

Family: Myb_DNA-bind_3 (PF12776)

Summary: Myb/SANT-like DNA-binding domain

Pfam includes annotations and additional family information from a range of different sources. These sources can be accessed via the tabs below.

The Pfam group coordinates the annotation of Pfam families in Wikipedia, but we have not yet assigned a Wikipedia article to this family. If you think that a particular Wikipedia article provides good annotation, please let us know.

This tab holds the annotation information that is stored in the Pfam database. As we move to using Wikipedia as our main source of annotation, the contents of this tab will be gradually replaced by the Wikipedia tab.

Myb/SANT-like DNA-binding domain Provide feedback

This presumed domain appears to be related to other Myb/SANT like DNA binding domains. In particular PF10545 seems most related. This family is greatly expanded in plants and appears in several proteins annotated as transposon proteins.

Internal database links

This tab holds annotation information from the InterPro database.

InterPro entry IPR024752

This domain, found in a range of uncharacterised proteins, may be related to Myb/SANT-like DNA binding domains.

Domain organisation

Below is a listing of the unique domain organisations or architectures in which this domain is found. More...

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Pfam Clan

This family is a member of clan HTH (CL0123), which has the following description:

This family contains a diverse range of mostly DNA-binding domains that contain a helix-turn-helix motif.

The clan contains the following 353 members:

AbiEi_3_N AbiEi_4 ANAPC2 AphA_like AraR_C Arg_repressor ARID ArsR B-block_TFIIIC B5 Bac_DnaA_C Baculo_PEP_N BetR BHD_3 BLACT_WH Bot1p BrkDBD BsuBI_PstI_RE_N C_LFY_FLO CaiF_GrlA CarD_CdnL_TRCF CDC27 Cdc6_C Cdh1_DBD_1 CDT1 CDT1_C CENP-B_N Costars CPSase_L_D3 Cro Crp CSN4_RPN5_eIF3a CSN8_PSD8_EIF3K CtsR Cullin_Nedd8 CUT CUTL CvfB_WH DBD_HTH DDRGK DEP Dimerisation Dimerisation2 DNA_meth_N DpnI_C DprA_WH DsrC DsrD DUF1016_N DUF1133 DUF1153 DUF1323 DUF134 DUF1441 DUF1492 DUF1495 DUF1670 DUF1804 DUF1819 DUF1836 DUF1870 DUF2089 DUF2250 DUF2316 DUF2513 DUF2582 DUF3116 DUF3253 DUF3853 DUF3860 DUF3908 DUF433 DUF4364 DUF4423 DUF4447 DUF480 DUF4817 DUF5635 DUF573 DUF6088 DUF6262 DUF6362 DUF6432 DUF6462 DUF6471 DUF722 DUF739 DUF742 DUF977 E2F_TDP EAP30 eIF-5_eIF-2B ELL ESCRT-II Ets EutK_C Exc F-112 FaeA Fe_dep_repr_C Fe_dep_repress FeoC FokI_C FokI_N Forkhead FtsK_gamma FUR GcrA GerE GntR GP3_package HARE-HTH HemN_C HNF-1_N Homeobox_KN Homeodomain Homez HPD HrcA_DNA-bdg HSF_DNA-bind HTH_1 HTH_10 HTH_11 HTH_12 HTH_13 HTH_15 HTH_16 HTH_17 HTH_18 HTH_19 HTH_20 HTH_21 HTH_22 HTH_23 HTH_24 HTH_25 HTH_26 HTH_27 HTH_28 HTH_29 HTH_3 HTH_30 HTH_31 HTH_32 HTH_33 HTH_34 HTH_35 HTH_36 HTH_37 HTH_38 HTH_39 HTH_40 HTH_41 HTH_42 HTH_43 HTH_45 HTH_46 HTH_47 HTH_48 HTH_49 HTH_5 HTH_50 HTH_51 HTH_52 HTH_53 HTH_54 HTH_55 HTH_56 HTH_57 HTH_58 HTH_59 HTH_6 HTH_7 HTH_8 HTH_9 HTH_ABP1_N HTH_AraC HTH_AsnC-type HTH_CodY HTH_Crp_2 HTH_DeoR HTH_IclR HTH_Mga HTH_micro HTH_OrfB_IS605 HTH_PafC HTH_ParB HTH_psq HTH_SUN2 HTH_Tnp_1 HTH_Tnp_1_2 HTH_Tnp_4 HTH_Tnp_IS1 HTH_Tnp_IS630 HTH_Tnp_ISL3 HTH_Tnp_Mu_1 HTH_Tnp_Mu_2 HTH_Tnp_Tc3_1 HTH_Tnp_Tc3_2 HTH_Tnp_Tc5 HTH_WhiA HxlR IBD IF2_N IRF KicB KilA-N Kin17_mid KORA KorB La LacI LexA_DNA_bind Linker_histone LZ_Tnp_IS481 MADF_DNA_bdg MAGE MARF1_LOTUS MarR MarR_2 MerR MerR-DNA-bind MerR_1 MerR_2 Mga Mnd1 MogR_DNAbind Mor MotA_activ MqsA_antitoxin MRP-L20 MukE Myb_DNA-bind_2 Myb_DNA-bind_3 Myb_DNA-bind_4 Myb_DNA-bind_5 Myb_DNA-bind_6 Myb_DNA-bind_7 Myb_DNA-binding Neugrin NFRKB_winged NOD2_WH NUMOD1 ORC_WH_C OST-HTH P22_Cro PaaX PadR PapB PAX PCI Penicillinase_R Phage_AlpA Phage_antitermQ Phage_CI_repr Phage_CII Phage_NinH Phage_Nu1 Phage_rep_O Phage_rep_org_N Phage_terminase PheRS_DBD1 PheRS_DBD2 PheRS_DBD3 Pou Pox_D5 PqqD PRC2_HTH_1 PUFD PuR_N Put_DNA-bind_N pXO2-72 Raf1_HTH Rap1-DNA-bind Rep_3 RepA_C RepA_N RepC RepL Replic_Relax RFX_DNA_binding Ribosomal_S18 Ribosomal_S19e Ribosomal_S25 Rio2_N RNA_pol_Rpc34 RNA_pol_Rpc82 RNase_H2-Ydr279 ROQ_II RP-C RPA RPA_C RQC Rrf2 RTP RuvB_C S10_plectin SAC3_GANP SANT_DAMP1_like SatD SelB-wing_1 SelB-wing_2 SelB-wing_3 SgrR_N Sigma54_CBD Sigma54_DBD Sigma70_ECF Sigma70_ner Sigma70_r2 Sigma70_r3 Sigma70_r4 Sigma70_r4_2 SinI Ski_Sno SLIDE Slx4 SMC_Nse1 SMC_ScpB SoPB_HTH SpoIIID SRP19 SRP_SPB STN1_2 Sulfolobus_pRN Suv3_N Swi6_N SWIRM Tau95 TBPIP TEA Terminase_5 TetR_N TFA2_Winged_2 TFIIE_alpha TFIIE_beta TFIIF_alpha TFIIF_beta Tn7_Tnp_TnsA_C Tn916-Xis TraI_2_C Trans_reg_C TrfA TrmB tRNA_bind_2 tRNA_bind_3 Trp_repressor UPF0122 UPF0175 Vir_act_alpha_C YdaS_antitoxin YjcQ YokU z-alpha

Alignments

We store a range of different sequence alignments for families. As well as the seed alignment from which the family is built, we provide the full alignment, generated by searching the sequence database (reference proteomes) using the family HMM. We also generate alignments using four representative proteomes (RP) sets and the UniProtKB sequence database. More...

View options

We make a range of alignments for each Pfam-A family. You can see a description of each above. You can view these alignments in various ways but please note that some types of alignment are never generated while others may not be available for all families, most commonly because the alignments are too large to handle.

  Seed
(30)
Full
(7513)
Representative proteomes UniProt
(10902)
RP15
(724)
RP35
(4399)
RP55
(6513)
RP75
(8212)
Jalview View  View  View  View  View  View  View 
HTML View             
PP/heatmap 1            

1Cannot generate PP/Heatmap alignments for seeds; no PP data available

Key: ✓ available, x not generated, not available.

Format an alignment

  Seed
(30)
Full
(7513)
Representative proteomes UniProt
(10902)
RP15
(724)
RP35
(4399)
RP55
(6513)
RP75
(8212)
Alignment:
Format:
Order:
Sequence:
Gaps:
Download/view:

Download options

We make all of our alignments available in Stockholm format. You can download them here as raw, plain text files or as gzip-compressed files.

  Seed
(30)
Full
(7513)
Representative proteomes UniProt
(10902)
RP15
(724)
RP35
(4399)
RP55
(6513)
RP75
(8212)
Raw Stockholm Download   Download   Download   Download   Download   Download   Download  
Gzipped Download   Download   Download   Download   Download   Download   Download  

You can also download a FASTA format file containing the full-length sequences for all sequences in the full alignment.

HMM logo

HMM logos is one way of visualising profile HMMs. Logos provide a quick overview of the properties of an HMM in a graphical form. You can see a more detailed description of HMM logos and find out how you can interpret them here. More...

Trees

This page displays the phylogenetic tree for this family's seed alignment. We use FastTree to calculate neighbour join trees with a local bootstrap based on 100 resamples (shown next to the tree nodes). FastTree calculates approximately-maximum-likelihood phylogenetic trees from our seed alignment.

Note: You can also download the data file for the tree.

Curation and family details

This section shows the detailed information about the Pfam family. You can see the definitions of many of the terms in this section in the glossary and a fuller explanation of the scoring system that we use in the scores section of the help pages.

Curation View help on the curation process

Seed source: Pfam-B_16 (Release 24.0)
Previous IDs: none
Type: Domain
Sequence Ontology: SO:0000417
Author: Bateman A
Number in seed: 30
Number in full: 7513
Average length of the domain: 90.90 aa
Average identity of full alignment: 21 %
Average coverage of the sequence by the domain: 31.66 %

HMM information View help on HMM parameters

HMM build commands:
build method: hmmbuild --amino -o /dev/null HMM SEED
search method: hmmsearch -Z 57096847 -E 1000 --cpu 4 HMM pfamseq
Model details:
Parameter Sequence Domain
Gathering cut-off 23.6 23.6
Trusted cut-off 23.6 23.6
Noise cut-off 23.5 23.5
Model length: 96
Family (HMM) version: 9
Download: download the raw HMM for this family

Species distribution

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Colour assignments

Archea Archea Eukaryota Eukaryota
Bacteria Bacteria Other sequences Other sequences
Viruses Viruses Unclassified Unclassified
Viroids Viroids Unclassified sequence Unclassified sequence

Selections

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This visualisation provides a simple graphical representation of the distribution of this family across species. You can find the original interactive tree in the adjacent tab. More...

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Tree controls

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AlphaFold Structure Predictions

The list of proteins below match this family and have AlphaFold predicted structures. Click on the protein accession to view the predicted structure.

Protein Predicted structure External Information
A0A0N7KH72 View 3D Structure Click here
A0A0N7KJ68 View 3D Structure Click here
A0A0N7KJL4 View 3D Structure Click here
A0A0N7KMC8 View 3D Structure Click here
A0A0N7KQD1 View 3D Structure Click here
A0A0P0V3F6 View 3D Structure Click here
A0A0P0V6X8 View 3D Structure Click here
A0A0P0VBI1 View 3D Structure Click here
A0A0P0VFR2 View 3D Structure Click here
A0A0P0VIF7 View 3D Structure Click here
A0A0P0VR86 View 3D Structure Click here
A0A0P0W0I7 View 3D Structure Click here
A0A0P0W563 View 3D Structure Click here
A0A0P0W6Z4 View 3D Structure Click here
A0A0P0W7W3 View 3D Structure Click here
A0A0P0WA82 View 3D Structure Click here
A0A0P0WJ32 View 3D Structure Click here
A0A0P0WJC3 View 3D Structure Click here
A0A0P0WKQ6 View 3D Structure Click here
A0A0P0WL24 View 3D Structure Click here
A0A0P0WWQ5 View 3D Structure Click here
A0A0P0WY02 View 3D Structure Click here
A0A0P0X1M8 View 3D Structure Click here
A0A0P0X3X1 View 3D Structure Click here
A0A0P0XGN9 View 3D Structure Click here
A0A0P0XK51 View 3D Structure Click here
A0A0P0XKN7 View 3D Structure Click here
A0A0P0XSZ4 View 3D Structure Click here
A0A0P0XUD2 View 3D Structure Click here
A0A0P0XVR7 View 3D Structure Click here
A0A0P0Y0Y4 View 3D Structure Click here
A0A0P0Y429 View 3D Structure Click here
A0A0P0Y882 View 3D Structure Click here
A0A0P0Y996 View 3D Structure Click here
A0A0R0E615 View 3D Structure Click here
A0A0R0E8T4 View 3D Structure Click here
A0A0R0EC79 View 3D Structure Click here
A0A0R0EII9 View 3D Structure Click here
A0A0R0EIJ3 View 3D Structure Click here
A0A0R0EK74 View 3D Structure Click here
A0A0R0ER35 View 3D Structure Click here
A0A0R0ER35 View 3D Structure Click here
A0A0R0EV79 View 3D Structure Click here
A0A0R0EWC1 View 3D Structure Click here
A0A0R0F161 View 3D Structure Click here
A0A0R0F1M4 View 3D Structure Click here
A0A0R0F3N4 View 3D Structure Click here
A0A0R0F8P9 View 3D Structure Click here
A0A0R0FCX9 View 3D Structure Click here
A0A0R0FFC5 View 3D Structure Click here
A0A0R0FHI5 View 3D Structure Click here
A0A0R0FJ06 View 3D Structure Click here
A0A0R0FMP8 View 3D Structure Click here
A0A0R0FQ07 View 3D Structure Click here
A0A0R0FVF1 View 3D Structure Click here
A0A0R0FWM6 View 3D Structure Click here
A0A0R0G1R0 View 3D Structure Click here
A0A0R0G4A6 View 3D Structure Click here
A0A0R0G507 View 3D Structure Click here
A0A0R0G7Q1 View 3D Structure Click here
A0A0R0GBL1 View 3D Structure Click here
A0A0R0GDV7 View 3D Structure Click here
A0A0R0GG54 View 3D Structure Click here
A0A0R0GIQ0 View 3D Structure Click here
A0A0R0GJZ8 View 3D Structure Click here
A0A0R0GL69 View 3D Structure Click here
A0A0R0GLA3 View 3D Structure Click here
A0A0R0GM27 View 3D Structure Click here
A0A0R0GQE4 View 3D Structure Click here
A0A0R0GVJ8 View 3D Structure Click here
A0A0R0H567 View 3D Structure Click here
A0A0R0HBN9 View 3D Structure Click here
A0A0R0HE32 View 3D Structure Click here
A0A0R0HE92 View 3D Structure Click here
A0A0R0HGB6 View 3D Structure Click here
A0A0R0HGZ9 View 3D Structure Click here
A0A0R0HHV0 View 3D Structure Click here
A0A0R0HID7 View 3D Structure Click here
A0A0R0HQW0 View 3D Structure Click here
A0A0R0HQW0 View 3D Structure Click here
A0A0R0HRA6 View 3D Structure Click here
A0A0R0HRE2 View 3D Structure Click here
A0A0R0HUG9 View 3D Structure Click here
A0A0R0HVG8 View 3D Structure Click here
A0A0R0HWN7 View 3D Structure Click here
A0A0R0I0I8 View 3D Structure Click here
A0A0R0I0X9 View 3D Structure Click here
A0A0R0I0Y8 View 3D Structure Click here
A0A0R0I3M2 View 3D Structure Click here
A0A0R0I522 View 3D Structure Click here
A0A0R0I550 View 3D Structure Click here
A0A0R0I5X4 View 3D Structure Click here
A0A0R0I652 View 3D Structure Click here
A0A0R0I9H0 View 3D Structure Click here
A0A0R0IB48 View 3D Structure Click here
A0A0R0IDJ7 View 3D Structure Click here
A0A0R0IQI4 View 3D Structure Click here
A0A0R0IQV5 View 3D Structure Click here
A0A0R0IT46 View 3D Structure Click here
A0A0R0ITU2 View 3D Structure Click here
A0A0R0IUA0 View 3D Structure Click here
A0A0R0J1A2 View 3D Structure Click here
A0A0R0J7A4 View 3D Structure Click here
A0A0R0JAU2 View 3D Structure Click here
A0A0R0JDF0 View 3D Structure Click here
A0A0R0JEI8 View 3D Structure Click here
A0A0R0JIS8 View 3D Structure Click here
A0A0R0JIT1 View 3D Structure Click here
A0A0R0JIT1 View 3D Structure Click here
A0A0R0JIT1 View 3D Structure Click here
A0A0R0JIT1 View 3D Structure Click here
A0A0R0JLK9 View 3D Structure Click here
A0A0R0JSK7 View 3D Structure Click here
A0A0R0JXH0 View 3D Structure Click here
A0A0R0JY43 View 3D Structure Click here
A0A0R0K0L2 View 3D Structure Click here
A0A0R0K1W3 View 3D Structure Click here
A0A0R0K3J5 View 3D Structure Click here
A0A0R0K4Z4 View 3D Structure Click here
A0A0R0K7T6 View 3D Structure Click here
A0A0R0KDU7 View 3D Structure Click here
A0A0R0KF67 View 3D Structure Click here
A0A0R0KFP8 View 3D Structure Click here
A0A0R0KFS4 View 3D Structure Click here
A0A0R0KFT4 View 3D Structure Click here
A0A0R0KFY2 View 3D Structure Click here
A0A0R0KG11 View 3D Structure Click here
A0A0R0KG12 View 3D Structure Click here
A0A0R0KJ06 View 3D Structure Click here
A0A0R0KL26 View 3D Structure Click here
A0A0R0KMF3 View 3D Structure Click here
A0A0R0KX74 View 3D Structure Click here
A0A0R0KY89 View 3D Structure Click here
A0A0R0L4P2 View 3D Structure Click here
A0A0R0L5H2 View 3D Structure Click here
A0A0R0L9C7 View 3D Structure Click here
A0A0R0LCR0 View 3D Structure Click here
A0A0R0LCV6 View 3D Structure Click here
A0A0R0LEG5 View 3D Structure Click here
A0A0R0LEY2 View 3D Structure Click here
A0A0R0LF54 View 3D Structure Click here
A0A0R0LFU2 View 3D Structure Click here
A0A0R0LGZ0 View 3D Structure Click here
A0A1D6E5W0 View 3D Structure Click here
A0A1D6E913 View 3D Structure Click here
A0A1D6EEW6 View 3D Structure Click here
A0A1D6EGH1 View 3D Structure Click here
A0A1D6EHP9 View 3D Structure Click here
A0A1D6EHT1 View 3D Structure Click here
A0A1D6EI56 View 3D Structure Click here
A0A1D6EIW9 View 3D Structure Click here
A0A1D6ENV5 View 3D Structure Click here
A0A1D6EZN0 View 3D Structure Click here
A0A1D6F0H2 View 3D Structure Click here
A0A1D6FIC3 View 3D Structure Click here
A0A1D6FL77 View 3D Structure Click here
A0A1D6FQP4 View 3D Structure Click here
A0A1D6G4R0 View 3D Structure Click here
A0A1D6GGE9 View 3D Structure Click here
A0A1D6GNR5 View 3D Structure Click here
A0A1D6GR11 View 3D Structure Click here
A0A1D6H1K8 View 3D Structure Click here
A0A1D6H379 View 3D Structure Click here
A0A1D6H4M2 View 3D Structure Click here
A0A1D6HBJ9 View 3D Structure Click here
A0A1D6HE29 View 3D Structure Click here
A0A1D6HKF2 View 3D Structure Click here
A0A1D6HQD9 View 3D Structure Click here
A0A1D6ILC3 View 3D Structure Click here
A0A1D6ISZ0 View 3D Structure Click here
A0A1D6IW58 View 3D Structure Click here
A0A1D6IY01 View 3D Structure Click here
A0A1D6J399 View 3D Structure Click here
A0A1D6JY94 View 3D Structure Click here
A0A1D6K8L0 View 3D Structure Click here
A0A1D6KE19 View 3D Structure Click here
A0A1D6KF82 View 3D Structure Click here
A0A1D6KFG9 View 3D Structure Click here
A0A1D6KGS1 View 3D Structure Click here
A0A1D6KJ92 View 3D Structure Click here
A0A1D6KP54 View 3D Structure Click here
A0A1D6KRB3 View 3D Structure Click here
A0A1D6KSC8 View 3D Structure Click here
A0A1D6L280 View 3D Structure Click here
A0A1D6L8S4 View 3D Structure Click here
A0A1D6LJN9 View 3D Structure Click here
A0A1D6LKQ7 View 3D Structure Click here
A0A1D6LKT4 View 3D Structure Click here
A0A1D6LKX6 View 3D Structure Click here
A0A1D6LL81 View 3D Structure Click here
A0A1D6MB22 View 3D Structure Click here
A0A1D6MWR7 View 3D Structure Click here
A0A1D6N1D1 View 3D Structure Click here
A0A1D6N3D9 View 3D Structure Click here
A0A1D6NBM0 View 3D Structure Click here
A0A1D6NCX5 View 3D Structure Click here
A0A1D6NJK4 View 3D Structure Click here
A0A1D6NMW4 View 3D Structure Click here
A0A1D6NZU5 View 3D Structure Click here
A0A1D6P1P6 View 3D Structure Click here
A0A1D6P200 View 3D Structure Click here
A0A1D6P2C5 View 3D Structure Click here
A0A1D6P4S2 View 3D Structure Click here
A0A1D6PJ27 View 3D Structure Click here
A0A1D6PQK6 View 3D Structure Click here
A0A1D6PRD5 View 3D Structure Click here
A0A1D6PTB7 View 3D Structure Click here
A0A1D6Q1S1 View 3D Structure Click here
A0A1D6Q4E2 View 3D Structure Click here
A0A1D6QH42 View 3D Structure Click here
A0A1D6QHK3 View 3D Structure Click here
A0A1D6QLA7 View 3D Structure Click here
A0A1D6QP26 View 3D Structure Click here
A0A1D6QPD9 View 3D Structure Click here
A0A1P8B324 View 3D Structure Click here
A0A1Q0YTN7 View 3D Structure Click here
A0A1R3LA27 View 3D Structure Click here
A0A1R3M021 View 3D Structure Click here
A0A1R3MJK1 View 3D Structure Click here
A3C4Y8 View 3D Structure Click here
B4FJV0 View 3D Structure Click here
B4FW34 View 3D Structure Click here
B4FY94 View 3D Structure Click here
B6UIH6 View 3D Structure Click here
B9G2B3 View 3D Structure Click here
B9GEA2 View 3D Structure Click here
C0PI30 View 3D Structure Click here
C4J8Y6 View 3D Structure Click here
F4JBG1 View 3D Structure Click here
F4JHK5 View 3D Structure Click here
F4K2V4 View 3D Structure Click here
F4KA16 View 3D Structure Click here
I1J758 View 3D Structure Click here
I1J8J4 View 3D Structure Click here
I1JUT4 View 3D Structure Click here
I1LI29 View 3D Structure Click here
I1MZ55 View 3D Structure Click here
I1MZ55 View 3D Structure Click here
I1MZ55 View 3D Structure Click here
K7K9I5 View 3D Structure Click here
K7K9I5 View 3D Structure Click here
K7KGD3 View 3D Structure Click here
K7KGD3 View 3D Structure Click here
K7KIC8 View 3D Structure Click here
K7KIC8 View 3D Structure Click here
K7KIC8 View 3D Structure Click here
K7KIC8 View 3D Structure Click here
K7KNA1 View 3D Structure Click here
K7KYF4 View 3D Structure Click here
K7L3H0 View 3D Structure Click here
K7L3H0 View 3D Structure Click here
K7L3H0 View 3D Structure Click here
K7L3H0 View 3D Structure Click here
K7L968 View 3D Structure Click here
K7LDM1 View 3D Structure Click here
K7LRE2 View 3D Structure Click here
K7LRP2 View 3D Structure Click here
K7LRP2 View 3D Structure Click here
K7LRP2 View 3D Structure Click here
K7MFV7 View 3D Structure Click here
K7MLQ1 View 3D Structure Click here
K7MMJ8 View 3D Structure Click here
K7MNX2 View 3D Structure Click here
K7MP11 View 3D Structure Click here
K7MQV1 View 3D Structure Click here
K7MS23 View 3D Structure Click here
K7UB48 View 3D Structure Click here
O65915 View 3D Structure Click here
O65915 View 3D Structure Click here
O81424 View 3D Structure Click here
O81424 View 3D Structure Click here
O82368 View 3D Structure Click here
Q0D438 View 3D Structure Click here
Q0DQ23 View 3D Structure Click here
Q0WRG4 View 3D Structure Click here
Q0WRG4 View 3D Structure Click here
Q10GY9 View 3D Structure Click here
Q2R0U2 View 3D Structure Click here
Q6DYE3 View 3D Structure Click here
Q6ZC86 View 3D Structure Click here
Q84M51 View 3D Structure Click here
Q9C771 View 3D Structure Click here
Q9C771 View 3D Structure Click here
Q9FFJ8 View 3D Structure Click here
Q9FFJ8 View 3D Structure Click here
Q9LVZ0 View 3D Structure Click here
Q9SK37 View 3D Structure Click here
Q9SK37 View 3D Structure Click here
Q9SK37 View 3D Structure Click here
Q9SK37 View 3D Structure Click here

trRosetta Structure

The structural model below was generated by the Baker group with the trRosetta software using the Pfam UniProt multiple sequence alignment.

The InterPro website shows the contact map for the Pfam SEED alignment. Hovering or clicking on a contact position will highlight its connection to other residues in the alignment, as well as on the 3D structure.

Improved protein structure prediction using predicted inter-residue orientations. Jianyi Yang, Ivan Anishchenko, Hahnbeom Park, Zhenling Peng, Sergey Ovchinnikov, David Baker Proceedings of the National Academy of Sciences Jan 2020, 117 (3) 1496-1503; DOI: 10.1073/pnas.1914677117;