# STOCKHOLM 1.0 #=GF ID ACD #=GF AC PF16671.6 #=GF DE Actin cross-linking domain #=GF AU Eberhardt R;0000-0001-6152-1369 #=GF GA 27.0 27.0 #=GF NC 20.5 20.4 #=GF TC 57.2 56.0 #=GF SE PDB:4e1f #=GF BM hmmbuild HMM.ann SEED.ann #=GF SM hmmsearch -Z 47079205 -E 1000 --cpu 4 HMM pfamseq #=GF TP Domain #=GF RN [1] #=GF RM 22898822 #=GF RT Crystal structure of the VgrG1 actin cross-linking domain of the #=GF RT Vibrio cholerae type VI secretion system. #=GF RA Durand E, Derrez E, Audoly G, Spinelli S, Ortiz-Lombardia M, #=GF RA Raoult D, Cascales E, Cambillau C; #=GF RL J Biol Chem. 2012;287:38190-38199. #=GF DR INTERPRO; IPR032074; #=GF DR SO; 0000417; polypeptide_domain; #=GF CC This domain is found in Vibrio cholerae RtxA toxin and VgrG1 #=GF CC protein. This domain cross-links to G-actin leading to #=GF CC cytoskeletal changes [1]. #=GF SQ 5 A0KHZ7.1/1942-2327 KAVPEFSSHFDGSSIGIENELTGLVVALPKNSAQKFGYVHDA.AGNPLFMLTKDMNQGGYTNPAGISDVKGINQWQTHTIELVTYPSEMQDQQAVEARKEAMLWLAREFTQHISQTNHTRLSDLVSEDGRFTLVISNANHVIAAGNGAARDGQGQTIGMTPSGQQATVAVSAKAFGS.GSSQEIRLLESAPWYHPELKDLLLSNMANVQWEDAATAQNVFAYLTSIYGKTADLAREYGIHINDWDPLAEGITPNAQGLTDPKVKNAWEILPRTKPVAMLALLSAHDRKLVSEQILATLKSAYSPALAQNIYDYFKFGGEVAGHGINNATTGDSKHPEPAILFEFRQVPNELSQFVPKSESTARVEVKTLDQFDPVSRRTIVAAVNNLV Q9KS12.2/1986-2371 KSVPGFKSHFASTSIGIENELSGLVVVLPKNSAQTFGYVHDS.QGNPLFMLTKDMNQGGYSNPVGINDIQGVNNWQTHTIELVTYPSEISDTAAVESRKEAMLWLAKEFTDHINQSNHQSLPHLVSDDGRFTLVISNSKHLIAAGNGTSIDAQGKTIGMTPSGQQATMAISAKEFGT.SSSPEVRLLESAPWYQAGLRDEFLANAKNTTLDDPATAQNVYAYLTSVYSKTADLAKEYGIYINDWDPASEGFSPNAQGLTDPKVKNAWSILPRTKPVRMLELLSAEDSRYVRQQIAEKLKGTYSESLAKNVFEYFQYGGEVAGHGINNATTGSVQQPEPAILFEFRSVPSALSDFVPKTASTVKVDVKALDHFDSASRKAIITEVNALV Q9KS45.1/726-1111 KATPDFPTHFPKSSIGIENELAGLVVAMPANSAQKFGYVKSA.QGDALFMLTKDMNQGSYQRPPSLQDGKNYQNWQTHTVELVSYPCEMDDKAAVETRKQAMLWLATHFTTHIDQSNHQPLAPIQSEDGRFVIEITNAKHVIAAGNGISAESQGQTITMTPSGQQATVGVAAKGFGT.SATPELRLLESAPWYQKSLKSQFASLTSAENLDDKELAANVFAYLTSIYLKTAELAKKFGIYINEWDPMSEQITPNANGLTDPKVKNAWEILPRTKPSKIVEILSKSDAKAVMKHIKPQLQSRYSESLSKNVFQYFQDGGEVAGHGINNATVGDKHSPELAILFEFRTVPNELQSYLPKTESTTKSEVKLLDQFDPMKRKTVIQQVESLV A0A2G9DK76.1/2869-3238 --APGFPSSFGSTSLGTESELSGFVVAVPQNADRTFAFVQRVdTGEPLVMVTKDMGQGAYGNPAKLAAAE-RGNWQTHTVELVTYPSRFGDEAALADRDGATRFLLDVFRDRLGTHNHAPLASLVSPDGQFRLQVTNDRHVIAAGRGMDLEEQP-SVSMPSGQQQATVGVRASELGApGSADSALLLDHAPWFRADFRQDEALRAVAATADAPERVENAYTYLKSVVSFLSDLVKKHDIPLGEYPG-------AGRALTHPQVKNDWKVLPRTRPNLILGTLSDHDRAL-TQRLLRETAPLGDETIWKEVRQYVMGGGAVAGHGIDKATIA----GEQALLFEFRELPDRLLPYVPREAAPTVAVSDPLAGLG-GRRIAVIREVNEF- A0A1H9MRZ7.1/9-316 -----YRSEFAGPSVGTEQELLGVRIGRKASGGSEIADVV-S.GGQVLVQITTDIGGGG-DAPFG---------YLGYTMEIKTSPTEVTDVAGWELRRGAIREVIAAIADMVLVK---GGSFTGGKLGAYDLVVHNGDHVVYGADTLST-------GVSGSSRHATFGLPFALLGT.EH---AALVSKAGWYE-DWSEEFDLIEGSSPWVDRDRSLRVYNYLRSVLTRLARLTSDYSLAVHDLYDL-KGFTGN---LYDSAIKNRWGVLPRTSPWVAIELLAKSDRERIRPTLLKCPSRVTDPVIWSAAVSHITQHRSLAGHTPKAPTYTEEELP--GTLFEFRT------------------------------------------ //