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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: A0A1D6K232_MAIZE (A0A1D6K232)

Summary

This is the summary of UniProt entry A0A1D6K232_MAIZE (A0A1D6K232).

Description: DNA-directed RNA polymerase subunit {ECO:0000256|RuleBase:RU004279}
Source organism: Zea mays (Maize) (NCBI taxonomy ID 4577)
Length: 1690 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
Pfam RNA_pol_Rpb1_1 11 431
low_complexity n/a 26 40
disorder n/a 151 167
disorder n/a 243 260
disorder n/a 262 265
disorder n/a 349 350
disorder n/a 373 374
disorder n/a 411 414
Pfam RNA_pol_Rpb1_2 433 618
disorder n/a 482 483
disorder n/a 485 491
disorder n/a 494 495
disorder n/a 500 501
disorder n/a 522 523
disorder n/a 600 604
Pfam RNA_pol_Rpb1_3 621 858
disorder n/a 676 678
disorder n/a 682 683
disorder n/a 730 731
disorder n/a 733 785
low_complexity n/a 777 789
low_complexity n/a 834 848
low_complexity n/a 856 867
Pfam RNA_pol_Rpb1_4 901 1009
disorder n/a 911 922
disorder n/a 965 967
disorder n/a 971 972
Pfam RNA_pol_Rpb1_5 1016 1632
low_complexity n/a 1152 1167
disorder n/a 1332 1480
low_complexity n/a 1351 1373
low_complexity n/a 1381 1415
low_complexity n/a 1467 1480

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession A0A1D6K232. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MADGQHIQAA SEEVDSIHFS FYSDDEIKRI SIKKITKSER LDAKNLPVPG
50
51
GLLDPAMGPI NDIDICKSCG QHSVRCPGHF GHIELAKPLF NPLLFMSLKN
100
101
LLHVTCFHCH KFRLNKEQVD RYVNELELLV KGDIVCAKNL EDSVEEAYLS
150
151
KEDENMNKTT SGDNSSSVKD KKTWTSIQLK EVLSIFSKIM KKRQKKCAKC
200
201
DMKSPTISSP IFGWLVKDTK ASAVRTNAIA DFKLKGDGDI HNSGETGVSG
250
251
LEEESSSPGM VSKDSINEVR GLSDDTIKEL VASSGKKHLL PTEVESILKD
300
301
LWKNEARFCM LLCDFQKNMS SEPEKRRGYE MFFLSSLLVA PNRFRPSTSS
350
351
SLGIMEHPQS VLLSKVQESN LALQHNNASS NHMDVLQRWM DLQRSVNVLY
400
401
DSSKGLARSE KNAHGIRQLL EKKEGILRQK MMGKRVNYAC RSVISPDPYL
450
451
AVNEIGIPPV FATRLTYPEK VTPWNTKRLQ EAIRNGADIH PGATHYRDNN
500
501
SMYKLQAVPA KRRSIAKMLP ASRGSICQPG RDPNCEFESK VVYRHLQDGD
550
551
IVLVNRQPTL HKPSMMAHFV RVLPGEKTLR MHYANCSTYN ADFDGDEMNV
600
601
HVPQDEISRA EAMNIVDANK QYIGPRSGDA VRGLIQDHIV GAVLLTKPDT
650
651
LLSREEYSQL VFGSCVPSSN CGSHHPAKVS AIEDYDTLEL VHPAIWKPRP
700
701
LWTGKQVITT ILNHLTKGCP PFTVEQKGKI PKEYLKEDPS AQKEKEDPSA
750
751
RKEAHSAKKG KREDPSAQKE KDSSVNKEKQ EKIQKQKQKD RSELVLYIHN
800
801
NELIKGIIDK AQFGKYGIVH TVHELYGAYT AGILLSTFSR LFTLFLQLHG
850
851
FTCGVDDLLL LPEKDKLRSK ILSGSEVRSN EVHWKFTGAD EDHKGDLVKL
900
901
HMEVEKAVRS NGESDTATLD NDMKNALNGI TTDVNKILFP DGLQKPFPGN
950
951
CLSLMTTTGA KGGPVNMNQI SSLLGQQELE GKRVPRMVSG KTLPCFPPWD
1000
1001
ISSRAGGFIS DRFLTGLRPQ EYYFHCMAGR EGLVDTAVKT SRSGYLQRCL
1050
1051
IKCLESLKVS YDHTVRDADG SIVQFCYGED GVDVLKTSFL NEFKELADNR
1100
1101
KAVLAKLGGC SKDPTLSKCN GYITELPPKL IDKAEEFLKH SKECCRYNIE
1150
1151
AKELKELLKV KFLSSLVDPG EAVGVVAAQS IGEPSTQMTL NTFHLAGRGD
1200
1201
MNVTLGIPRL KEILMTASDN IRTPVMKCPL LEHISEDDAK MVVAKLRRVR
1250
1251
VADVVEKIEV CTVPFYNSNG RVSTLYKLQM KLYPQDQLES GLTIDECQAT
1300
1301
LRTVFVEAME HAIEKHLDLL YKINEIRAVK IEDTEGSLLN GDEESQSRHA
1350
1351
DGGDTGTSDD DDQNDNDVDL GTDAEKMKRQ EKDEMEYDDD TETEEGMGSE
1400
1401
SEESDEDPAE SGDDSQEADK EHTISKSETT SVDDLPYSVK KGKKSKDDRG
1450
1451
TAKLEEKNQN EGRLDDQKQG QIKKRRKKLK HTIHVESSDL DFEIHYAFHD
1500
1501
EPHILLAQIA KKIARTILVK ACNNIDHCKI VKPMHNHTRL ETAGVNFEVV
1550
1551
WNLSEYISVN DITSNDIHAM LKTYGVEAAR GTIIKEVSGV FEPYGINVDM
1600
1601
RHLSLIADFM TLDGGYRPMN RLGIGQFSTS PFGKMTFETA TKFIVDAATH
1650
1651
GEADFLECPS ASVCLGKPPK VGTGIFGLLQ NLELEQPKNI           
1690
 

Show the unformatted sequence.

Checksums:
CRC64:5EC8B3623AD04B0F
MD5:d5e9f3c5f40d8aea27ef277b955a2ef8

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;