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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: A0A1D6KSD4_MAIZE (A0A1D6KSD4)

Summary

This is the summary of UniProt entry A0A1D6KSD4_MAIZE (A0A1D6KSD4).

Description: DNA ligase {ECO:0000256|RuleBase:RU000617}
Source organism: Zea mays (Maize) (NCBI taxonomy ID 4577)
Length: 909 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
sig_p n/a 1 22
low_complexity n/a 4 18
disorder n/a 15 19
low_complexity n/a 15 26
low_complexity n/a 43 63
disorder n/a 52 275
low_complexity n/a 63 69
low_complexity n/a 80 107
low_complexity n/a 117 137
low_complexity n/a 141 158
low_complexity n/a 153 171
Pfam DNA_ligase_A_N 296 472
low_complexity n/a 378 389
disorder n/a 423 428
disorder n/a 430 433
disorder n/a 436 437
Pfam DNA_ligase_A_M 537 741
Pfam DNA_ligase_A_C 766 877
low_complexity n/a 865 874
disorder n/a 875 909

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession A0A1D6KSD4. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MFVLTATTST TTATSLLLRC RPLPSPKTVT LATPPAILPF CIRSRFSASA
50
51
SASASSVSPQ SRATAAAAAG KSREKKPPTA RAKRADAVPA AAAPGMSASG
100
101
GGSAGKRTVA DVLMGNARAA ASKAKKAAPS PKKPQAKTDG AEVEPEAAAV
150
151
AEKPPSPARS KRASSPAKSP KLLPDGSTSS AKSKGPAALA QLDAAKENPP
200
201
SPKRSKTLAA KSDTQPSGEG VVGLGHTDGK KGSPSPTKAK GQASQSEEKK
250
251
RAASPKKAKT TDSPKTEKNI TLELKKKGSE FDPMAVAYWK PGEPVPFLFL
300
301
ARALDLISNE SGRIVITEIL SNVFRTVMAT TPDDLLATVY LSANRIAPPH
350
351
EGIELGIGDA SVIRALAEAY GRKEEHVKKD LKELGDLGLV AKASRSSQKM
400
401
MFKPKPLTIA RVLSTFRTIA KESGKDSQDK KRNHMKGLLV AATDCEPQYI
450
451
TRLLQSKMRI GLAEKTVQMA LGQAAVYADK NPLPPKVQSP FEEAAKIIKQ
500
501
AYSVLPIYDK IVPAILEVGV WKLPETCKFS IGVPVGPMLA KATKSVSEII
550
551
DKFQGLEYTC EYKYDGERAQ IHCMEDGSVE IYSRNAERNT GKYPDVVDAV
600
601
SRFRKATVKS FVLDCEIVAY DREKQKILPF QILSTRARKG VTINDIKVSV
650
651
CTFGFDILYI NGKPLLQEQL KIRREHLYNS FEEVPGVFKL ATAITSNDLE
700
701
EIQKFLDTAV NSSCEGLIIK TLDKDATYEP AKRSNNWLKL KKDYMDSIGD
750
751
SLDLVPIAAF YGRGKRTGVF GSFLLACYDE QNEEYQTICN IGTGFSEQQL
800
801
EERSASLRSK VIEKPKAYYR FGDTMNPDVW FEPSEVWEVK AADLSISPVH
850
851
RAANGIVDPN KGISLRFPRL LRLRDDKSPE QATTSDQVAD MYRSQKINHG
900
901
YNQEDEDDD                                             
909
 

Show the unformatted sequence.

Checksums:
CRC64:5483B10F12D56E5B
MD5:7dddc2d73922f40c3eda835599e75e1f

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;