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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: A0A1D6PSU5_MAIZE (A0A1D6PSU5)

Summary

This is the summary of UniProt entry A0A1D6PSU5_MAIZE (A0A1D6PSU5).

Description: RNA polymerase sigma factor {ECO:0000256|PIRNR:PIRNR000767}
Source organism: Zea mays (Maize) (NCBI taxonomy ID 4577)
Length: 553 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
low_complexity n/a 11 32
low_complexity n/a 53 64
low_complexity n/a 70 107
disorder n/a 111 112
disorder n/a 139 142
disorder n/a 145 146
disorder n/a 181 185
low_complexity n/a 187 201
disorder n/a 188 196
disorder n/a 207 219
low_complexity n/a 211 223
Pfam Sigma70_r2 302 372
Pfam Sigma70_r3 395 471
low_complexity n/a 405 414
disorder n/a 418 419
disorder n/a 455 472
Pfam Sigma70_r4 483 536
low_complexity n/a 532 544

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession A0A1D6PSU5. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MACLAPQFKW APSAAAHMPS SSSSSSYSRC SALRVHCAVT SAAVVEDRTN
50
51
GSAAQLRLAY AAPAIQRNFE ATLASEALLN EEAVVAAAAA EAVALARAAA
100
101
EAAQEVVQIV QRNNHQPVIR PKKCVDNYLA NEILRTEMRS SSPDMYANNP
150
151
LMEYLDSYGI MDAEDELDAY AQYTENIAVK SARQSERKAR RTRAAIKAST
200
201
TLHASQKVAL SSKKKRSKGS SSSMNPLGSL WKMTGRRLLT AKEEVEFSEG
250
251
IQDLLKLEAI QAELIEYNGG QPTFSQWATA AGVDEKTLRK RLNYGIYCKN
300
301
RMVTSNVRLV ISIAREFEGP GMDFYDLIQE GMQGLIRGAE KFDSSKGFRF
350
351
STYSHWWIKQ AMRKSVSEQS QIFRLPVCPP PKSCSFPDIN AHMVEASYRV
400
401
KECTKRLRRK LRRRPTNEEI AVDTGIPIKR VEAAVNLPKY SVSLDSKIGS
450
451
TDMTYQEVTA DPSAETAEEM LNRMSMKKDV HMALDTLTTR EKQVVVLRFG
500
501
LEDGRIRTLQ EIGNIMGVSR ERIRQIESGA FRKLRSKKKV KALKDYLVPV
550
551
GNW                                                   
553
 

Show the unformatted sequence.

Checksums:
CRC64:F388FCC197C8A266
MD5:67dc6abd1ffbeb6810a273f37f9dc9df

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;