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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: A0A1D8PUA6_CANAL (A0A1D8PUA6)

Summary

This is the summary of UniProt entry A0A1D8PUA6_CANAL (A0A1D8PUA6).

Description: DNA-directed RNA polymerase subunit {ECO:0000256|RuleBase:RU004279}
Source organism: Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast) (NCBI taxonomy ID 237561)
Length: 1728 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
Pfam RNA_pol_Rpb1_1 12 340
disorder n/a 39 56
disorder n/a 126 128
disorder n/a 153 170
disorder n/a 193 199
low_complexity n/a 238 248
disorder n/a 246 254
disorder n/a 309 317
disorder n/a 319 322
Pfam RNA_pol_Rpb1_2 342 507
disorder n/a 390 392
disorder n/a 399 405
disorder n/a 485 494
Pfam RNA_pol_Rpb1_3 510 669
coiled_coil n/a 676 696
disorder n/a 677 678
disorder n/a 681 682
Pfam RNA_pol_Rpb1_4 693 800
disorder n/a 694 698
disorder n/a 701 702
disorder n/a 705 710
disorder n/a 713 714
disorder n/a 733 734
disorder n/a 790 792
Pfam RNA_pol_Rpb1_5 807 1399
Pfam RNA_pol_Rpb1_6 873 1057
disorder n/a 878 885
Pfam RNA_pol_Rpb1_7 1142 1276
disorder n/a 1150 1151
low_complexity n/a 1411 1422
disorder n/a 1463 1464
disorder n/a 1470 1485
disorder n/a 1503 1514
disorder n/a 1522 1524
low_complexity n/a 1532 1718
Pfam RNA_pol_Rpb1_R 1537 1550
disorder n/a 1537 1728
Pfam RNA_pol_Rpb1_R 1551 1564
Pfam RNA_pol_Rpb1_R 1565 1578
Pfam RNA_pol_Rpb1_R 1579 1592
Pfam RNA_pol_Rpb1_R 1593 1606
Pfam RNA_pol_Rpb1_R 1607 1620
Pfam RNA_pol_Rpb1_R 1621 1634
Pfam RNA_pol_Rpb1_R 1635 1648
Pfam RNA_pol_Rpb1_R 1649 1662
Pfam RNA_pol_Rpb1_R 1663 1676
Pfam RNA_pol_Rpb1_R 1677 1690
Pfam RNA_pol_Rpb1_R 1691 1704
Pfam RNA_pol_Rpb1_R 1705 1718
low_complexity n/a 1711 1725

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession A0A1D8PUA6. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MSRQFPYSSA PLRSVKEVQF GLLSPEEVRA ISVAKIEYPE TMDQTTKRPR
50
51
EGGLNDPRLG SIDRNFRCQT CGEDMAECPG HFGHIELAKP VFHIGFIAKI
100
101
KKACESVCMH CGKLLLDETN PAMAQAIKIR DPKKRFNAVW SLCKTKMVCE
150
151
TDNNEDEMTD QPSRGGCGHP QPTIRRDGLK LWGTWKQNKN YDDNDQPERR
200
201
LLTPSEILNV FKHISPEDCY KMGFNEDYAR PEWMLITVLP VPPPPVRPSI
250
251
AFNETARGED DLTFKLADII KANINVQRLE TDGSPQHVIS EFEALLQFHV
300
301
ATYMDNDIAG QPQALQKTGR PIKSIRARLK GKEGRLRGNL MGKRVDFSAR
350
351
TVISGDPNLD LDQVGVPISI AKTLTYPEIV TPYNIHKLTE LVRNGPNEHP
400
401
GAKYVIRDTG DRIDLRYNKR AGDIALQYGW KVERHLMDDD PVLFNRQPSL
450
451
HKMSMMAHRV RVMPYSTFRL NLSVTSPYNA DFDGDEMNLH VPQSPETRSE
500
501
LSQICAVPLQ IVSPQSNKPV MGIVQDTLCG IRKMTLRDIF IEYDQVMNMC
550
551
YWIPNWDGVI PPPAVVKPKQ LWTGKQLLSL AIPKGIHLQR FDGGRDLLSP
600
601
KDTGMLIVDG EIMFGVVDKK TVGATGGGLI HTVMREKGPK VCAELFSSIQ
650
651
KVVNYWLLHN GFSIGIGDTI ADAQTMRDVN KTIQEAKQKV QEIIIDAQHN
700
701
KLEPEPGMTL RESFEHNVSR VLNQARDTAG RSAEMSLKDL NNVKQMVTSG
750
751
SKGSFINISQ MSACVGQQIV EGKRIPFGFG DRSLPHFTKD DYSPESKGFV
800
801
ENSYLRGLTP QEFFFHAMAG REGLIDTAVK TAETGYIQRR LVKALEDIMV
850
851
HYDGTTRNSL GDIIQFIYGE DGIDGTQVEK QSVDTIPGSD ESFERRYKID
900
901
VLDTENVISE SLLESGKEIR GDVQLQKILD EEYNQLLKDR KYLREVCFPN
950
951
GDFSWPLPVN LRRIIQNAQQ IFHNGRYRAS DLRLEEIVLG VKELCMKLLV
1000
1001
VRGDTPLVKE AQENATLLFQ CLLRSRLAAR RVIEEFKLNR ASFEWVMGEI
1050
1051
ETQFQKSIVH PGEMVGVVAA QSIGEPATQM TLNTFHYAGV SSKNVTLGVP
1100
1101
RLKEILNVAK NIKTPAMTVF LDPEVASDIE KAKIVQSAIE HTTLKNVTSS
1150
1151
TEIYYDPDPR TTVIEDDYDT VEAYFAIPDQ KVEESIDKQS PWLLRLELDR
1200
1201
AKMLDKQLTM AQVAEKISQN FGEDLFVIWS DDTADKLIIR CRVVRDPKSL
1250
1251
DEDADAEEDQ ILKRIEAHML ESISLRGIPG ITRVFMMQHK VSHPDETGEF
1300
1301
KQGKEWVLET DGVNLADVMA VPGVDSTRTY SNDFIEVLSV LGIEATRSSL
1350
1351
YKEILNVIAF DGSYVNYRHM ALLVDVMTSR GHLMAITRHG INRSDTGALM
1400
1401
RCSFEETVEI LLDAAAAAEL DDCKGISENV MLGQMAPLGT GSFDLMVDDR
1450
1451
MLQKAPSSMA MDDIADGGGA TPYKDYENAR DENIDIDAGA GFSPIHIAQM
1500
1501
NEGNIGGLTS YGGQPTSPAA TSPFSYGYNS ITSPGYTSPG YGYSPTSPSY
1550
1551
SPTSPSYAPT SPAYSPTSPS YAPTSPAYSP TSPSYAPTSP AYSPTSPAYS
1600
1601
PTSPSYSPTS PQYSPTSPSY SPTSPSYSPT SPSYSPTSPA YSPTSPSYSP
1650
1651
TSPSYSPTSP QYSPTSPSYS PTSPQYSPTS PSYSPTSPQY SPTSPQYSPT
1700
1701
SPQYSPTSPQ YSPGSPGYEP EPPKKDEN                        
1728
 

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Checksums:
CRC64:CC31D853041DF463
MD5:ad02281d3a04572c3d422345174ec41f

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;