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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: XERC_SYNFM (A0LEB8)

Summary

This is the summary of UniProt entry XERC_SYNFM (A0LEB8).

Description: Tyrosine recombinase XerC {ECO:0000255|HAMAP-Rule:MF_01808}
Source organism: Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) (NCBI taxonomy ID 335543)
Length: 328 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
disorder n/a 1 13
Pfam Phage_int_SAM_1 23 107
disorder n/a 55 56
disorder n/a 58 61
Pfam Phage_integrase 129 308
low_complexity n/a 144 157
disorder n/a 316 328

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession A0LEB8. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MAPGTLDDNS ADGSEATWSE ASARFIAHLR HERGLSAETV RAYAGDLDQF
50
51
REHMNATAGT ADPRLSQVDA DAIRGYLAAL HKTRKKTSRA RKLSTLRSFY
100
101
HFLNDRELVR ENPAALVAYP KLGTKIPSFL GVDDVFHLLD SLNAGAARAG
150
151
ASWRRCRNWA LFECMYSTGV RVSELAGMDE SDVDFHEGMV RVLGKGSKER
200
201
IVPVGGKALD AVKLYLRVLD SQFPEARRMG SALFRNARGR RLTTRSVHRL
250
251
LRMELRRCGL WQHLSPHGLR HTFATHLLNS GADLRAIQEM LGHSNLSTTQ
300
301
RYTHVHVDQL MKVYDAAHPR SRRDRSGK                        
328
 

Show the unformatted sequence.

Checksums:
CRC64:88E50D4B1ABFA91E
MD5:97b40ca9ba13f385a2ed0d6761a700f3

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;