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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: TPC2L_RAT (B2RYU6)

Summary

This is the summary of UniProt entry TPC2L_RAT (B2RYU6).

Description: Trafficking protein particle complex subunit 2-like protein
Source organism: Rattus norvegicus (Rat) (NCBI taxonomy ID 10116)
Length: 139 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
Pfam Sedlin_N 7 137

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession B2RYU6. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MAVCIAVIAK ENYPLYIRST PTENELKFHY MVHTSLDVVD EKISAMGKAL
50
51
VDQRELYLGL LYPTEDYKVY GYVTNSKVKF VMVVDSSNTA LRDNEIRSMF
100
101
RKLHNSYTDV MCNPFYNPGD RIQSRAFDTM VTSMMVQVC            
139
 

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Checksums:
CRC64:027C7A0849B96662
MD5:9d57fc65bdfc11623c0493e61af0800b

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;