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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: CRA1A_DANRE (C7DZK3)

Summary

This is the summary of UniProt entry CRA1A_DANRE (C7DZK3).

Description: Collagen alpha-1(XXVII) chain A {ECO:0000250|UniProtKB:Q8IZC6, ECO:0000303|PubMed:20041163}
Source organism: Danio rerio (Zebrafish) (Brachydanio rerio) (NCBI taxonomy ID 7955)
Length: 1783 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
sig_p n/a 1 39
low_complexity n/a 3 19
disorder n/a 180 181
disorder n/a 234 235
disorder n/a 241 266
low_complexity n/a 242 262
low_complexity n/a 255 266
low_complexity n/a 263 279
disorder n/a 275 276
disorder n/a 283 285
disorder n/a 288 1554
low_complexity n/a 346 359
low_complexity n/a 390 415
Pfam Collagen 552 613
low_complexity n/a 566 599
low_complexity n/a 616 633
Pfam Collagen 635 703
low_complexity n/a 635 662
low_complexity n/a 701 722
low_complexity n/a 734 752
low_complexity n/a 803 824
Pfam Collagen 818 886
low_complexity n/a 824 845
low_complexity n/a 854 879
low_complexity n/a 872 890
low_complexity n/a 956 1004
low_complexity n/a 1007 1025
low_complexity n/a 1055 1073
low_complexity n/a 1097 1115
low_complexity n/a 1112 1130
low_complexity n/a 1148 1163
low_complexity n/a 1168 1184
Pfam Collagen 1205 1268
low_complexity n/a 1241 1262
low_complexity n/a 1305 1320
low_complexity n/a 1322 1350
low_complexity n/a 1395 1410
low_complexity n/a 1461 1479
low_complexity n/a 1470 1485
low_complexity n/a 1482 1494
Pfam Collagen 1496 1553
low_complexity n/a 1497 1515
low_complexity n/a 1530 1552
disorder n/a 1564 1566
disorder n/a 1572 1574
disorder n/a 1576 1580
Pfam COLFI 1587 1673
Pfam COLFI 1666 1782

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession C7DZK3. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MNLATRRRVR RTSRLVAKRA LLLCILLYCT SFGFTQVLFE DVDVLQRLAL
50
51
RAELGSRAVP AGVISLRSGV ILTTRARVTT PTRSLFPPEL FWNCTIILSV
100
101
RSHRLNSAFL FSVLSGNRIQ LGLEISPGKL TLHAGPGNAA TFLYNLHDGR
150
151
WHHLAFVING RSVTLHSPCS ESDSGVTQEL PVLPERLNPR GTFRLGGSSA
200
201
LLPGVVPFEG AVCQFDVVPS AQAQQNICSA IRRQCRENDT YRPAPPALLP
250
251
LPSRHAPPLL AHTLPPNRTF TFTPTNFLLA PVNGAGGSSS VRMSDGVRPK
300
301
PSSTTPPPLA LMQTGIDAPL SLSLVTHKPS LRTPKPTASK PGVWLTPTKP
350
351
ARPKPTPGKA SPKLNVSKSF GPKPTARLAA SKLGSKAIGP KPTPLKPSKP
400
401
VKKPTSVPKP NPTKNASIGP RPTNSNKKQN AILKPLPAPK PTVPKRPSPT
450
451
NKKPLQPKNK SHTTPLTPKS TLAPNSTSKK PLPTLKSTSF TTAAPNKPPK
500
501
TLETPKVNPD KSKTPVPYST PRTPRFSIQS VTLPAFDDFQ SFEVEPTRFS
550
551
LLVGAPGLKG DQGESGLPGP PGKPGQPGMR GPRGPPGPHG KPGRPGPTGL
600
601
KGKKGDPGLS PGKAPKGDKG DVGLPGPVGL VGVEGRKGQK GHPGPPGLPG
650
651
EPGEQGPVGE AGAKGYPGRQ GLPGPIGPVG PKGARGFIGI PGLFGLPGAD
700
701
GERGSPGPPG KRGKMGRPGF PGDFGERGPP GLDGEPGVIG APGPPGVLGL
750
751
IGDMGPAGTV GVPGLNGLKG VPGNMGESGL KGDKGDVGLP GEQGEIGFQG
800
801
DKGVQGLPGL PGPRGKPGPQ GKTGEIGPSG LPGPPGPEGF PGDIGKPGLN
850
851
GPEGPKGKPG ARGLPGPRGA AGREGDEGPL GPPGPFGLEG QMGSKGFPGA
900
901
LGLEGVKGEQ GVTGKAGPMG ERGLVGFIGP GGEAGLAGEK GDRGEMGLPG
950
951
PPGEKGSTGH PGTPGEGGPP GPPGSPGSPG SRGPIGIRGP KGRRGPRGPD
1000
1001
GVPGEIGTEG KKGPDGPPGK IGFPGHAGKI GESGEVGPKG FPGIQGPSGA
1050
1051
TGDKGIAGEP GPSGPPGTLG PQGNPGPKGP AGKVGDSGLP GEPGEKGSIG
1100
1101
LAGNAGAAGL IGARGEPGLE GEAGPAGPDG TKGEKGDMGT EGEQGVRGDP
1150
1151
GIKGKDGPPG DPGLTGVRGP EGKSGKSGER GKPGLKGAKG NIGHLGETGS
1200
1201
VGKIGPIGTT GPKGSRGTIG HAGAPGRMGL QGDPGISGYE GHKGPQGPIG
1250
1251
PPGPKGAKGE QGDDGKVEGP TGAPGLRGPV GKRGDRGEPG DPGYVGQQGV
1300
1301
DGLRGKPGAP GLPGDPGPRG TQGPKGSKGE QGQKGKQGQQ GERGSRGSPG
1350
1351
VVGLPGPRGT VGREGREGFP GTDGLAGKDG SRGTPGDQGD DGEFGLPGKP
1400
1401
GAPGKVGVIG LPGPQGSFGP KGERGLPGHP GPSGKRGFKG GMGLPGPQGD
1450
1451
RGSKGQPGDI GEPGFPGMLG MFGPKGPPGD FGPKGIQGPK GPQGNMGRGG
1500
1501
LAGPVGVIGP IGNPGSRGDT GNKGELGVQG PRGAPGPRGP PGLPGPPGIP
1550
1551
LAMNQDFGLG VVQPVFRETH TQKIEGRGLL DMPMLDQAPE ILRTLDYLSS
1600
1601
LVHSLKNPLG TRDHPARLCR DLHDCRDTLY DGTYWIDPNL GCSSDSIEVM
1650
1651
CNFSSGGRTC LRPITTAKLE FSVGRVQMNF LHLLSAGAEQ RITIHCLNVT
1700
1701
IWSHAPNQPP SQNAVQFHSW IGEVLEPDVL EDTCWQLNGR WQHADFLFRV
1750
1751
LDPALLPVVR ISNLPKVMPS SRFHLEVGPV CFL                  
1783
 

Show the unformatted sequence.

Checksums:
CRC64:FD67E429E1222930
MD5:dafde07299a19ddc81a40d09f7f53a66

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;