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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: D3ZP60_RAT (D3ZP60)

Summary

This is the summary of UniProt entry D3ZP60_RAT (D3ZP60).

Description: von Willebrand factor A domain-containing 5B1 {ECO:0000313|Ensembl:ENSRNOP00000022282}
Source organism: Rattus norvegicus (Rat) (NCBI taxonomy ID 10116)
Length: 1216 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
sig_p n/a 1 17
Pfam VIT_2 2 79
disorder n/a 102 103
disorder n/a 105 106
disorder n/a 171 173
disorder n/a 178 186
disorder n/a 237 241
disorder n/a 266 267
disorder n/a 313 314
Pfam VWA_3 352 506
disorder n/a 583 585
disorder n/a 597 601
disorder n/a 608 803
disorder n/a 826 841
disorder n/a 843 844
disorder n/a 874 877
disorder n/a 942 949
disorder n/a 968 969
disorder n/a 971 994
low_complexity n/a 991 999
disorder n/a 1028 1034
disorder n/a 1036 1039
disorder n/a 1099 1122
low_complexity n/a 1105 1120
low_complexity n/a 1124 1135
disorder n/a 1127 1129

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession D3ZP60. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MPGLLNCFTG AALPLTASDV TSYVSGYALG LTASLTYGNL EAQPFQGLFV
50
51
YPTDECTTVV GFEAVIADRV VTIQLRDKAK LDRSYLDVQS ATVTGNLPEE
100
101
EIPITPGKVT LDEDLERILF VVNLGTIAPM ENVTIFISTS SELPTLPSGA
150
151
VRVLLPAICA PTVHPFCAHR FGSSRQQPRG KDPHCFGTQS KDSYKRLCLA
200
201
TLLDTKVTNP MEYEFKFQLE IRGPCLLAGV ESPTHEIRAD AAPSAHSAKS
250
251
IIITLAKKHT FDRPVEILLH PSEPHMPHVL VEKGDMTLGE FYQHLKRKAD
300
301
FVRGTKKDNI AERKTEVIRK RLHKDIPHHS VIMLNFCPDL ESVQPNPRRT
350
351
HGEFIFLIDR SSSMSKTNIQ CIKEAMLVAL KSLMPACLFN VIGFGSTFKT
400
401
VFASSQIYNE ENLALACECI QRMRADMGGT NIFSPLKWVL RQPLRQGHPR
450
451
LLFLITDGSV NNTGKVLELV RNHASSIRCY SFGIGPTVCY RLVKGLASVS
500
501
KGSAEFLMEG ERLQPKMVKS LKKAMAPVLS DVTVEWVFPE TTEALISPVS
550
551
TSSLFPGERL VGYGIVCDAS LYISNSRSDK RRKYGMLHAQ ESSSSVFYHS
600
601
QDEGLRPGSG NCAKNFNQGQ TKDAHPCNGD SLSHHGLDGS RRRRAYSTNQ
650
651
ISSHKACSRA TTASDPTGTT RRYPLRKAKV QDLAHQSSSE SQQWQIDLQP
700
701
LLTRGHDPSQ GPRLHGPGAR RPSLLPQGCQ PMRFSGPEPQ AWSPVRELGL
750
751
GSGRKSVLNS RSSEDLATEP PPFPSTLEPE TSSDLEPTAE LEEQAPYRTA
800
801
TPSPVLGKVL VKGVCDNQHM QWEVSFELEP PALRREDTQN DDMWGETFHH
850
851
LAARAIIREF EHLAQREDEI ELGSNRRYQV NAVHTSKACN VISKYTAFVP
900
901
VDINKRQYLP TVVKYHNSGA LLSFRNLTRQ WKGFSTGLRR SQSMLREHSS
950
951
AAGDSKFQTL ALHESLTSTF NKTPSPGHEK YATAEGPPQN LSTSSLSSTK
1000
1001
ASEAIFGSRL ILNKSRLLTR ATKNFLSKSL PKAPEVNPGS QSSDYVPLVS
1050
1051
LQLASGAFLL NEVFCRTIQI PMEKLKWTSP FNCLRMSLVT RRHDLKTQSP
1100
1101
GDCTSLSSPP PPSDDISLKS GAKDSSDQES SELLEHTGKL WATVVALAWL
1150
1151
EHSSASYIIE WELVAAKASS WVELQEVPEG RTLSTIKATA RQLFVLLRHW
1200
1201
DENLEFNMLC YNPNYM                                     
1216
 

Show the unformatted sequence.

Checksums:
CRC64:2F381EC63B87ECA3
MD5:12a9f6a40caabbf7ad5e95369c6d5bbf

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;