Please note: this site relies heavily on the use of javascript. Without a javascript-enabled browser, this site will not function correctly. Please enable javascript and reload the page, or switch to a different browser.
0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: SYCM_ARATH (F4IPY2)

Summary

This is the summary of UniProt entry SYCM_ARATH (F4IPY2).

Description: Cysteine--tRNA ligase, chloroplastic/mitochondrial {ECO:0000305}
Source organism: Arabidopsis thaliana (Mouse-ear cress) (NCBI taxonomy ID 3702)
Length: 563 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

Show or hide the data used to generate the graphic in JSON format.

Source Domain Start End
Pfam tRNA-synt_1e 77 376
disorder n/a 228 231
Pfam DALR_2 418 487
disorder n/a 448 449
disorder n/a 457 460
coiled_coil n/a 483 503
disorder n/a 506 522
disorder n/a 547 563

Show or hide domain scores.

Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession F4IPY2. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MASSVLNLFK SCRPFTPIRF SSLPKSQFRI QFPLRPGKET QLRRCFTTLS
50
51
SLTDGGAPIS GGKELWLHNT MSRKKELFKP KVEGKVGMYV CGVTAYDLSH
100
101
IGHARVYVTF DVLLRYLKHL GYEVSYVRNF TDVDDKIIAR AKELEEDPIS
150
151
LSRRFCEEFN RDMEQLQCLD PSVQPRVSDH IPQIIDLIKQ ILDNGYAYKV
200
201
DGDIYFSVDK FPTYGKLSGR KLEDNRAGER VAVDTRKKHP ADFALWKAAK
250
251
EGEPFWESPW GRGRPGWHIE CSAMSAAYLG YSFDIHGGGM DLVFPHHENE
300
301
IAQSCAACDS SNISYWIHNG FVTVDSEKMS KSLGNFFTIR QVIDLYHPLA
350
351
LRLFLMGTHY RSPINYSDFL LESASERIFY IYQTLHDCES ALGEKDSTFE
400
401
NGSVPSDTLT SINTFRTEFV ASMSDDLLTP VTLAAMSEPL KTINDLIHTR
450
451
KGKKQARREE SLKALETTIR DVLTILGLMP TSYSEVLEQL KEKALKRAGL
500
501
KEEDVLQRVQ ERTDARKNKE YERSDAIRKD LAKVGIALMD SPEGTTWRPA
550
551
IPLALQEPVT TTP                                        
563
 

Show the unformatted sequence.

Checksums:
CRC64:3A449280DA3FB30F
MD5:329ff717a25b6c455f6d9c4011518144

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;