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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: SYDM_ARATH (F4JJT9)

Summary

This is the summary of UniProt entry SYDM_ARATH (F4JJT9).

Description: Aspartate--tRNA ligase, chloroplastic/mitochondrial {ECO:0000305}
Source organism: Arabidopsis thaliana (Mouse-ear cress) (NCBI taxonomy ID 3702)
Length: 664 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
low_complexity n/a 3 14
disorder n/a 41 46
low_complexity n/a 58 69
Pfam tRNA_anti-codon 91 176
Pfam tRNA-synt_2 198 638
Pfam GAD 390 489
disorder n/a 530 536
disorder n/a 643 649
disorder n/a 653 658

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession F4JJT9. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MSLLLRTLPL RPTRFLSATA ISISNATNFF VVPKRTNPLP GTRRTFSSSP
50
51
VAAASGDVVV KPVPSPPSVL RWVSRTELCG ELSVNDVGKR VHLCGWVALH
100
101
RVHGGLTFLN LRDHTGIVQV RTLPDEFPEA HGLINDMRLE YVVLVEGTVR
150
151
SRPNESVNKK MKTGFVEVVA EHVEILNPVR TKLPFLVTTA DENKDLIKEE
200
201
IRLRFRCLDL RRQQMKNNIV LRHNVVKLIR RYLEDRHGFI EIETPILSRS
250
251
TPEGARDYLV PSRIQSGTFY ALPQSPQLFK QMLMVSGFDK YYQIARCFRD
300
301
EDLRADRQPE FTQLDMEMAF MPMEDMLKLN EDLIRKVFSE IKGIQLPDPF
350
351
PRLTYADAMD RYGSDRPDTR FDLELKDVSN VFTESSFRVF TEALESGGII
400
401
KVLCVPLGAK KYSNSALKKG DIYNEAMKSG AKGLPFLKVL DNGEIEGIAA
450
451
LVSSLDSAGK INFVKQCGAA PGDLILFGVG PVTSVNKTLD RLRLFVAHDM
500
501
DLIDHSKHSI LWVTDFPMFE WNEPEQRLEA LHHPFTAPKP EDMDDLPSAR
550
551
ALAYDMVYNG VEIGGGSLRI YKRDVQEKVL EIIGISPEEA ESKFGYLLEA
600
601
LDMGAPPHGG IAYGLDRMVM MLGGASSIRD VIAFPKTTTA QCALTRTPSE
650
651
VDPKQLQDLS IRTK                                       
664
 

Show the unformatted sequence.

Checksums:
CRC64:E85E8993CA20CD56
MD5:3712431b4547599f660005f757009950

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;