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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: F6PDP0_DANRE (F6PDP0)

Summary

This is the summary of UniProt entry F6PDP0_DANRE (F6PDP0).

Description: Atrophin 1 {ECO:0000313|Ensembl:ENSDARP00000116176}
Source organism: Danio rerio (Zebrafish) (Brachydanio rerio) (NCBI taxonomy ID 7955)
Length: 1666 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

Show or hide the data used to generate the graphic in JSON format.

Source Domain Start End
disorder n/a 1 988
low_complexity n/a 11 36
low_complexity n/a 65 72
low_complexity n/a 85 109
low_complexity n/a 119 131
low_complexity n/a 124 146
low_complexity n/a 151 174
low_complexity n/a 191 205
low_complexity n/a 306 316
low_complexity n/a 345 365
low_complexity n/a 392 405
low_complexity n/a 408 417
low_complexity n/a 414 429
low_complexity n/a 457 485
Pfam Atrophin-1 558 1073
low_complexity n/a 651 664
low_complexity n/a 662 673
low_complexity n/a 669 683
low_complexity n/a 744 766
low_complexity n/a 762 778
low_complexity n/a 799 819
low_complexity n/a 864 893
low_complexity n/a 915 922
low_complexity n/a 922 938
low_complexity n/a 942 968
disorder n/a 994 997
coiled_coil n/a 1006 1053
disorder n/a 1010 1069
low_complexity n/a 1012 1028
low_complexity n/a 1028 1049
low_complexity n/a 1056 1067
low_complexity n/a 1071 1096
disorder n/a 1078 1079
disorder n/a 1084 1142
low_complexity n/a 1095 1137
Pfam Atrophin-1 1133 1188
disorder n/a 1144 1149
low_complexity n/a 1146 1163
disorder n/a 1155 1159
disorder n/a 1165 1211
low_complexity n/a 1178 1216
disorder n/a 1215 1216
disorder n/a 1221 1222
low_complexity n/a 1226 1245
disorder n/a 1229 1232
disorder n/a 1234 1235
low_complexity n/a 1245 1278
disorder n/a 1255 1278
disorder n/a 1280 1297
disorder n/a 1314 1317
low_complexity n/a 1314 1336
disorder n/a 1319 1574
low_complexity n/a 1349 1376
low_complexity n/a 1390 1437
low_complexity n/a 1436 1450
low_complexity n/a 1464 1488
low_complexity n/a 1483 1492
low_complexity n/a 1493 1515
Pfam Atrophin-1 1511 1665
low_complexity n/a 1529 1545
disorder n/a 1576 1579
disorder n/a 1581 1583
disorder n/a 1586 1587
disorder n/a 1591 1623
low_complexity n/a 1611 1627
low_complexity n/a 1642 1647
disorder n/a 1651 1657
disorder n/a 1660 1661

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession F6PDP0. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MKTRTHKESM PARSGRRRGG SEERRGRRPH PSPSRAERNE RQTQRTAGEE
50
51
LSVGRFNRRS QGHDSSESEG EEHLPPPKRQ KVQDSSNPSA PPISTNTPTS
100
101
APPPASSNSQ SRESDNEDGQ SQGSRSSVVG SLANSSSSIS SGRDIDQDNR
150
151
SSSPSLSASP LASLDSESDS PDSPKQGDKN KDGGGSKCVA EERRGSGRSE
200
201
DSRPEDQKDS EGGIEGDLSP LKSSASHYTS HHGMVDNTND PSSNRKSYFP
250
251
LDSKVASKLE YTSPGGPEVI HTSSRIPSKT STQCGKPGVG GAEYSHGNSN
300
301
VSHASPLPPP PALKPLEVGQ NAPSGDSKAD KPEKGDKSAP PSLLPQTSTI
350
351
PQQPPPPNTH HYTPTSWSGG PPTNCPGNWG YVRYPGNHHT HPSQQPPVQQ
400
401
QLPSVYNTTS STRHSSHPPY LSHPHPHPHK EFLPRYGTTA ERERAGREFG
450
451
NRDFPASNSS SNANSSSGSI CGSTSGGGGP NSNVSRDFGT SIPGQSRDYA
500
501
SNRDGPSGPQ SGREYAPGFR DRERGTGREF PLPNQQLQAQ GREFVPENTG
550
551
GGGCHSRDKE NRWGELSSQV RESGSNNYAG NPNQAPVGAQ SSALPSATLA
600
601
NRDPTSSPQN STSHPSFSTA NSIPPNRDYS SPMDANVQGQ TPQASSNSAD
650
651
LPPPPHYLRE YPPPGAKDPY PPPGSSSSSV PLSGVQREFP SPPGLAPNLT
700
701
REYPGGPLPH HSHYPGQTGL PMQHRDRERE KDSTASSLHS NRNHPPSLSP
750
751
SSSGSGTGHG HPTSSTYPPP LPPPSTSSHG QPPPIASLPG NHARQGPYSS
800
801
SNQTPPTPLS PLPSPSNNPI GGFTFPLTSA PSVPLPASGV STSCPSGCRP
850
851
TPYHGTLSSH TPFSSSYHGN GNHGNSNASG NAPNNSNSTS TPSLLHSPQN
900
901
NKVQPHIGNA GHNNSTSTSS TSLGGDGHPD SSSGPVPPTV IKEEPVEERE
950
951
ELESPPPVLR SPSPEPKPVD IPIHASQSAR FHRVLDRGSG NSCARSDVLF
1000
1001
VPLDGSKLWK KRNEAIERAR REVEQRARDL REKERERERE KERERDLDRH
1050
1051
LQQKDSGTSA GLGAAGARQG SSLFFPSSSS ILLDPSSSSS SSVNPSHPAV
1100
1101
HPQHHPAHHA AHPHHIHPSH LHPSLSHSIP HSLLLPSMAG GSPVVGGPQG
1150
1151
ALGIGLGGPY LGPDTPALRT LSEYARPHAM SPLSAAARAQ AHHPHLHHHP
1200
1201
HPHMHAHAQA HPHVHPSFFL SQFQNPALAH PHHLPADAAT AAAILGFLYG
1250
1251
GGLEGGPVHP GPGPGPGGLA GAGLGGMGFP HAVAAQRERV KPGFEFKSEE
1300
1301
RVYTAGALAD PAIALSHAHS HAHSHSLLLG GGAGGGPPVS EVALYGTTPP
1350
1351
PAPPPQALAA AARNPNPVPP PLSVPPTSSI LPATLPTHQA PAGAPVTPAA
1400
1401
SAPPPQPPPP PPPPPPPTAS SLHHPSPHST FPTTHPSCQP PPLPAQAPPS
1450
1451
ERYPTPVRTP PSTERARSVE RERERERVIP AAERERERDR ERAGTGGGAA
1500
1501
GGGTTAGGGG GTGGGDSLSR LQMLNVTPHH HQHSHIHSHL HLHQQDTAAG
1550
1551
GVHPLMDPLA SGSPLARLPY PGAALGPPIL AHSLTDSEVL RQQLFGGPFR
1600
1601
EMPQSSSLGG SMSAAHQLQA MQQAQSAEIQ FQRLALEQQW IHHHHHHSLT
1650
1651
QDEYYSHLKK ESDKTL                                     
1666
 

Show the unformatted sequence.

Checksums:
CRC64:6BE4E98D1DA25EA6
MD5:c237ef5cc0b6b0205713b9865d7a1574

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;