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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: G3V6K9_RAT (G3V6K9)

Summary

This is the summary of UniProt entry G3V6K9_RAT (G3V6K9).

Description: V(D)J recombination-activating protein 1 {ECO:0000256|RuleBase:RU366024}
Source organism: Rattus norvegicus (Rat) (NCBI taxonomy ID 10116)
Length: 1040 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
disorder n/a 9 13
Pfam RAG1_imp_bd 11 288
disorder n/a 41 63
disorder n/a 68 70
disorder n/a 76 78
disorder n/a 124 135
disorder n/a 137 138
disorder n/a 225 227
disorder n/a 242 243
low_complexity n/a 243 253
disorder n/a 246 254
Pfam zf-C3HC4 290 328
Pfam zf-RAG1 351 380
Pfam RAG1 381 1028
disorder n/a 381 385
coiled_coil n/a 401 421
disorder n/a 449 454
disorder n/a 605 610
disorder n/a 827 829
disorder n/a 1025 1028

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession G3V6K9. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MAVPLPSTLR LSSAPDEIQH PHIKFSEWKF KLFRVRSFEK APEEAQKEKD
50
51
SSEGKPCLEQ SPVVLDKPGG QNSVLTQRAL KLHPKFSKKF HVDGKSSDKA
100
101
IHQARLRHFC RICGNHFKSD GHNRRYPVHG PVDAKTQSLF RKKEKRVTSW
150
151
PDLIARVFRI DVKSDVDSIH PTEFCHNCWS IMHRKFGSAH SQVYCPRNVT
200
201
VEWHPHTPSC DICFTAHRGL KRKRHQPNVQ LSKKLKTVLN HARRDRRKRT
250
251
QARVSSKEVM KKISNCSKIH LSTKLLAVDF PAHFVKSISC QICEHILADP
300
301
VETTCKHLFC RICILRCLKV MGSYCPSCRY PCFPTDLQSP VKSFLSILNS
350
351
LMVKCPAQEC NEEVSLEKYN HHVSSHKESK ETLVHINKGG RPRQHLLSLT
400
401
RRAQKHRLRE LKIQVKEFAD KEEGGDVKSV CLTLFLLALR ARNEHRQADE
450
451
LEAIMQGRGS GLQPAVCLAI RVNTFLSCSQ YHKMYRTVKA ITGRQIFQPL
500
501
HALRNAEKVL LPGYHPFEWQ PPLKNVSSRT DVGIIDGLSG LASSVDEYPV
550
551
DTIAKRFRYD SALVSALMDM EEDILDGMRS QDLDDYVSGP FTVVVKESCD
600
601
GMGDVSEKHG SGPAVPEKAV RFSFTVMRVT VEHGSQNVKI FEEPKPNSEL
650
651
CCKPLCLMLA DESDHETLTA ILSPLIAERE AMKSSELLLE MGGIPRTFKF
700
701
IFRGTGYDEK LVREVEGLEA SGSVYICTLC DATRLEASQN LVFHSITRSH
750
751
AENLQRYEVW RSNPYHESVE ELRDRVKGVS AKPFIETVPS IDALHCDIGN
800
801
AAEFYKIFQL EIGEVYKNPN ASKEERKRWQ ATLDKHLRKR MNLKPIMRMN
850
851
GNFARKLMTQ ETVDAVCELI PSEERHEALR ELMDLYLKMK PVWRSSCPAK
900
901
ECPESLCQYS FNSQRFAELL STKFKYRYEG KITNYFHKTL AHVPEIIERD
950
951
GSIGAWASEG NESGNKLFRR FRKMNARQSK CYEMEDVLKH HWLYTSKYLQ
1000
1001
KFMNAHNALK NSGFTMNSKE TLGDSLDIED SLESQDSMEF           
1040
 

Show the unformatted sequence.

Checksums:
CRC64:C4CABC36B3AFD28F
MD5:8dc1d098746d764d3bfad5e2b7f537bc

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;