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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: O01806_CAEEL (O01806)

Summary

This is the summary of UniProt entry O01806_CAEEL (O01806).

Description: Sjogren Syndrome antigen B homolog {ECO:0000313|EMBL:CCD67305.1}
Source organism: Caenorhabditis elegans (NCBI taxonomy ID 6239)
Length: 396 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
disorder n/a 1 5
Pfam La 16 73
disorder n/a 81 95
disorder n/a 99 101
Pfam RRM_1 112 181
low_complexity n/a 163 172
disorder n/a 170 173
coiled_coil n/a 192 219
low_complexity n/a 192 215
disorder n/a 199 220
Pfam RRM_3 230 338
disorder n/a 264 291
disorder n/a 300 304
disorder n/a 308 310
disorder n/a 314 396
low_complexity n/a 329 362
low_complexity n/a 389 395

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession O01806. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MGETAAAVHD DADQKIIKQL EYYFGNINLP RDKFLQEKLK EDDGWVPITT
50
51
MLNFNRLASI SKDTEKIANA VKNSGSGIIS VSEDNQKIRR NEENPVPENS
100
101
LEYWQKIKHR TVYMKGFSTD TQLDDIIQWA NQFGETENVL MRRLKPGDRT
150
151
FKGSVFITYK TREEAEAAQK AEVKFGETEL TKMMQDEYWT LKNKETKEAR
200
201
AANKAAKSAK NTSEAIESEK AQHAVRYEKG LILAVDGLGP DSTIDSIKTF
250
251
FKLHGSVGYV AHENGGKTAE IRFNNDSEGA QKAWDNAVAA GTDGKVILQE
300
301
AELSARVLDG EEEEKYWTEF NARKNQRQGG GRGGRGGRGG RGGRGGRGGR
350
351
GGRGGRGDRR GDKRSANDEG ADGSDEPKAK RTVFAEDGAP AAAAAE    
396
 

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Checksums:
CRC64:A2D828A4AFAA3C34
MD5:0eabbb528f5cd069311651c4f761a2a1

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;