Please note: this site relies heavily on the use of javascript. Without a javascript-enabled browser, this site will not function correctly. Please enable javascript and reload the page, or switch to a different browser.
0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: MEF2D_RAT (O89038)

Summary

This is the summary of UniProt entry MEF2D_RAT (O89038).

Description: Myocyte-specific enhancer factor 2D
Source organism: Rattus norvegicus (Rat) (NCBI taxonomy ID 10116)
Length: 507 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

Show or hide the data used to generate the graphic in JSON format.

Source Domain Start End
disorder n/a 6 7
Pfam SRF-TF 10 57
disorder n/a 69 70
disorder n/a 78 81
disorder n/a 83 84
Pfam HJURP_C 90 154
disorder n/a 90 115
disorder n/a 140 144
disorder n/a 146 225
low_complexity n/a 149 162
low_complexity n/a 159 174
disorder n/a 228 234
disorder n/a 237 308
disorder n/a 311 314
disorder n/a 316 320
disorder n/a 322 339
disorder n/a 341 345
disorder n/a 348 503
low_complexity n/a 358 391
low_complexity n/a 426 452
low_complexity n/a 467 477

Show or hide domain scores.

Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession O89038. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MGRKKIQIQR ITDERNRQVT FTKRKFGLMK KAYELSVLCD CEIALIIFNH
50
51
SNKLFQYAST DMDKVLLKYT EYNEPHESRT NADIIETLRK KGFNGCDSPE
100
101
PDGEDSLEQS PLLEDKYRRA SEELDGLFRR YGSSVPAPNF AMPVTVPVSN
150
151
QSSMQFSNPS SSLVTPSLVT SSLTDPRLLS PQQPALQRNS VSPGLPQRPA
200
201
SAGAMLGRDL NSANGACPNP VGNGYVSARA SPGLLPVANG NGLNKVIPAK
250
251
SPPPPTHNTQ LGAPSRKPDL RVITSQGGKG LMHHLNNAQR LGVSQSTHSL
300
301
TTPVVSVATP SLLSQGLPFS SMPTAYNTDY QLPSAELSSL PAFSSPAGLA
350
351
LGNVTAWQQP QQPQQPQPPQ PPQSQPQPPQ PQPQQPPQQQ PHLVPVSLSN
400
401
LIPGSPLPHV GAALTVTTHP HISIKSEPVS PSRERSPAPP PPAVFPAARP
450
451
EPGEGLSSPA GGSYETGDRD DGRGDFGPTL GLLRPAPEPE AEGSAVKRMR
500
501
LDTWTLK                                               
507
 

Show the unformatted sequence.

Checksums:
CRC64:303D4A865805FA41
MD5:b09e2a48125e0c09a25a567245df5a8e

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;