Please note: this site relies heavily on the use of javascript. Without a javascript-enabled browser, this site will not function correctly. Please enable javascript and reload the page, or switch to a different browser.
2  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: SKI3_YEAST (P17883)

Summary

This is the summary of UniProt entry SKI3_YEAST (P17883).

Description: Superkiller protein 3
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (NCBI taxonomy ID 559292)
Length: 1432 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

Show or hide the data used to generate the graphic in JSON format.

Source Domain Start End
Pfam TPR_22 151 241
low_complexity n/a 321 332
disorder n/a 340 398
low_complexity n/a 364 416
coiled_coil n/a 376 404
Pfam TPR_8 1019 1052
disorder n/a 1110 1111

Show or hide domain scores.

Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P17883. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MSDIKQLLKE AKQELTNRDY EETIEISEKV LKLDPDNYFA HIFLGKALSS
50
51
LPASNNVSSN RNLERATNHY VSAAKLVPDN LLAWKGLFLL FRTTEVVPDI
100
101
LSYDEYFDLC GQYADALLKQ EQSQVELIND IKLLKKTHPD CQKAFYQHLK
150
151
PGSLMAETIG RHLSTPQDAL LNLIKILSNI ETTEIGKTLS QNRLKLKASD
200
201
PDYQIKLNSF SWEIIKNSEI DQLYNQLVNI LADDQKRSEI ENQWLEYRIK
250
251
VLKSMPLDVK KDFFTKVKEM VEDMVLVNHQ SLLAWQKYFE WTDYEDLDNM
300
301
DAPLIIKYFK KFPKDPLAMI LYSWLSSKLS KYDIKSLESA NKPPEGHKKT
350
351
EKETDIKDVD ETNEDEVKDR VEDEVKDRVE DEVKDQDEEA KEDEEEDLDD
400
401
IEIGLLEEEV VTVLTENIVK CKNNILAHRI LCQYYLLTKE YEAALPYIKN
450
451
GISLIAYNIK DLGVHLPLTK REFSLDLATV YTYVDAPKDH NAALKLYDNI
500
501
LSGDFSNIQA KMGKGIIFIE RKNWKDAMTL LTQVHEQSPN NLEVLSELSW
550
551
SKAHMGYMDE ALAGLDTVIK GIKGMDLRSI DFRALNLWRQ AKVYIMKHAS
600
601
INDAKQENVK CAFKLLIQSI KILDTFAPGF STLGDIYCHY YKDHLRAFKC
650
651
YFKAFDLDAG DYTAAKYITE TYASKPNWQA ASSIASRLIK GEKAKAELRS
700
701
NNWPFRVVGI AHLEKQEESD SIEWFQSALR VDPNDVESWV GLGQAYHACG
750
751
RIEASIKVFD KAIQLRPSHT FAQYFKAISL CDVGEYLESL DILEKVCQEA
800
801
ATEESFQIGL VEVLMRCSLD LYSQGFLLKS VSIAKDTIER IKIIISELKC
850
851
ENQQVWIYLS QVLRLFIWIE SKVDTLPVES LVSIFENSQF SGSEEIDSVD
900
901
NIKIDTLLDS TTDDNVSIAC KFLILASKYS VSDQKFTDIA GTVRASYWYN
950
951
IGISELTAFI TLKEPQYRDA AIFAFKKSIQ LQSNTSETWI GLGIATMDIN
1000
1001
FRVSQHCFIK ATALEPKATN TWFNLAMLGL KKKDTEFAQQ VLNKLQSLAP
1050
1051
QDSSPWLGMA LILEEQGDII GSSKLFAHSF ILSNGRSKAA QFMYAKNVLE
1100
1101
NHINNGDDER DIETVEKLTT ASIALEQFFK KSPDSQFALQ CALLTLERLH
1150
1151
HYENANELAN RLIGILEKKF EKTQDERELF NFAIIKGQFA RIHLGLGNFE
1200
1201
LSIENADLSQ GIISESSDEK SMKTKISNHI CLGLSYFFLN DFDQTLNQFQ
1250
1251
ELLSISKDSK HLVVLIAKVL YDVGESDTKE IALQELTEYI ATSGADLLVT
1300
1301
LTIAAMSILD DKREDLSIIL EELKALPLSK QIIDKHKDAP YLIEEITKRL
1350
1351
YRNDTGKQVW QRSAYFFPNN LKVWERLDKN IQRRIASNGQ NKVTAEEMSK
1400
1401
LYCESKNLRS IQRGMFLCPW NVTAVKALNE CF                   
1432
 

Show the unformatted sequence.

Checksums:
CRC64:18FFF78D7CA5A6E4
MD5:161dd94eb30af080dc60208034d9288c

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
TPR_22 151 - 241 4BUJ B 151 - 241 Show 3D Structure View in InterPro
F 151 - 241 Show 3D Structure View in InterPro
5MC6 i 151 - 241 Show 3D Structure View in InterPro
TPR_8 1019 - 1052 4BUJ B 1019 - 1052 Show 3D Structure View in InterPro
F 1019 - 1052 Show 3D Structure View in InterPro
5MC6 i 1019 - 1052 Show 3D Structure View in InterPro
×

The parts of the structure corresponding to the Pfam family are highlighted in blue.

Loading Structure Data

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;