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3  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: GLCB1_SOYBN (P25974)

Summary

This is the summary of UniProt entry GLCB1_SOYBN (P25974).

Description: Beta-conglycinin beta subunit 1 {ECO:0000305}
Source organism: Glycine max (Soybean) (Glycine hispida) (NCBI taxonomy ID 3847)
Length: 439 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
sig_p n/a 1 23
Pfam Cupin_2 74 150
disorder n/a 116 121
disorder n/a 129 131
disorder n/a 196 197
low_complexity n/a 199 207
disorder n/a 208 209
coiled_coil n/a 211 231
disorder n/a 224 230
disorder n/a 232 237
Pfam Cupin_1 240 401
disorder n/a 310 313
low_complexity n/a 312 323
disorder n/a 317 328
disorder n/a 414 427

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P25974. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MMRVRFPLLV LLGTVFLASV CVSLKVREDE NNPFYLRSSN SFQTLFENQN
50
51
GRIRLLQRFN KRSPQLENLR DYRIVQFQSK PNTILLPHHA DADFLLFVLS
100
101
GRAILTLVNN DDRDSYNLHP GDAQRIPAGT TYYLVNPHDH QNLKIIKLAI
150
151
PVNKPGRYDD FFLSSTQAQQ SYLQGFSHNI LETSFHSEFE EINRVLFGEE
200
201
EEQRQQEGVI VELSKEQIRQ LSRRAKSSSR KTISSEDEPF NLRSRNPIYS
250
251
NNFGKFFEIT PEKNPQLRDL DIFLSSVDIN EGALLLPHFN SKAIVILVIN
300
301
EGDANIELVG IKEQQQKQKQ EEEPLEVQRY RAELSEDDVF VIPAAYPFVV
350
351
NATSNLNFLA FGINAENNQR NFLAGEKDNV VRQIERQVQE LAFPGSAQDV
400
401
ERLLKKQRES YFVDAQPQQK EEGSKGRKGP FPSILGALY            
439
 

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Checksums:
CRC64:86D20314FC21D9E7
MD5:1483cda7727b5461692780338512b642

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Cupin_1 240 - 401 1IPJ A 218 - 379 Show 3D Structure View in InterPro
B 218 - 379 Show 3D Structure View in InterPro
C 218 - 379 Show 3D Structure View in InterPro
1IPK A 217 - 378 Show 3D Structure View in InterPro
B 217 - 378 Show 3D Structure View in InterPro
C 217 - 378 Show 3D Structure View in InterPro
1UIJ A 217 - 378 Show 3D Structure View in InterPro
B 217 - 378 Show 3D Structure View in InterPro
C 194 - 378 Show 3D Structure View in InterPro
D 217 - 378 Show 3D Structure View in InterPro
E 217 - 378 Show 3D Structure View in InterPro
F 194 - 378 Show 3D Structure View in InterPro
Cupin_2 74 - 150 1IPJ A 52 - 128 Show 3D Structure View in InterPro
B 52 - 128 Show 3D Structure View in InterPro
C 52 - 128 Show 3D Structure View in InterPro
1IPK A 51 - 127 Show 3D Structure View in InterPro
B 51 - 127 Show 3D Structure View in InterPro
C 51 - 127 Show 3D Structure View in InterPro
1UIJ A 51 - 127 Show 3D Structure View in InterPro
B 51 - 127 Show 3D Structure View in InterPro
C 51 - 127 Show 3D Structure View in InterPro
D 51 - 127 Show 3D Structure View in InterPro
E 51 - 127 Show 3D Structure View in InterPro
F 51 - 127 Show 3D Structure View in InterPro
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The parts of the structure corresponding to the Pfam family are highlighted in blue.

Loading Structure Data

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;