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44  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: PSB6_HUMAN (P28072)

Summary

This is the summary of UniProt entry PSB6_HUMAN (P28072).

Description: Proteasome subunit beta type-6
Source organism: Homo sapiens (Human) (NCBI taxonomy ID 9606)
Length: 239 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
low_complexity n/a 2 21
disorder n/a 17 25
Pfam Proteasome 31 213
low_complexity n/a 83 94
low_complexity n/a 161 172

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P28072. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MAATLLAARG AGPAPAWGPE AFTPDWESRE VSTGTTIMAV QFDGGVVLGA
50
51
DSRTTTGSYI ANRVTDKLTP IHDRIFCCRS GSAADTQAVA DAVTYQLGFH
100
101
SIELNEPPLV HTAASLFKEM CYRYREDLMA GIIIAGWDPQ EGGQVYSVPM
150
151
GGMMVRQSFA IGGSGSSYIY GYVDATYREG MTKEECLQFT ANALALAMER
200
201
DGSSGGVIRL AAIAESGVER QVLLGDQIPK FAVATLPPA            
239
 

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Checksums:
CRC64:7DF4081DC735930C
MD5:0c59df5f6d0d5d782b88245293cde576

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Proteasome 31 - 213 5LN3 1 31 - 213 NGL View in InterPro
35 - 213 4R3O H 1 - 179 NGL View in InterPro
V 1 - 179 NGL View in InterPro
4R67 H 1 - 179 NGL View in InterPro
j 1 - 179 NGL View in InterPro
V 1 - 179 NGL View in InterPro
x 1 - 179 NGL View in InterPro
5A0Q H 1 - 179 NGL View in InterPro
V 1 - 179 NGL View in InterPro
5GJQ a 1 - 179 NGL View in InterPro
o 1 - 179 NGL View in InterPro
5GJR a 1 - 179 NGL View in InterPro
o 1 - 179 NGL View in InterPro
5L4G 6 1 - 179 NGL View in InterPro
Z 1 - 179 NGL View in InterPro
5LE5 b 1 - 179 NGL View in InterPro
N 1 - 179 NGL View in InterPro
5LEX b 1 - 179 NGL View in InterPro
N 1 - 179 NGL View in InterPro
5LEY b 1 - 179 NGL View in InterPro
N 1 - 179 NGL View in InterPro
5LEZ b 1 - 179 NGL View in InterPro
N 1 - 179 NGL View in InterPro
5LF0 b 1 - 179 NGL View in InterPro
N 1 - 179 NGL View in InterPro
5LF1 b 1 - 179 NGL View in InterPro
N 1 - 179 NGL View in InterPro
5LF4 b 2 - 180 NGL View in InterPro
N 2 - 180 NGL View in InterPro
5LF6 b 1 - 179 NGL View in InterPro
N 1 - 179 NGL View in InterPro
5LF7 b 2 - 180 NGL View in InterPro
N 2 - 180 NGL View in InterPro
5M32 b 1 - 179 NGL View in InterPro
N 1 - 179 NGL View in InterPro
5T0C AN 1 - 179 NGL View in InterPro
BN 1 - 179 NGL View in InterPro
5T0G N 1 - 179 NGL View in InterPro
5T0H N 1 - 179 NGL View in InterPro
5T0I N 1 - 179 NGL View in InterPro
5T0J N 1 - 179 NGL View in InterPro
5VFO n 1 - 179 NGL View in InterPro
N 1 - 179 NGL View in InterPro
5VFP n 1 - 179 NGL View in InterPro
N 1 - 179 NGL View in InterPro
5VFQ n 1 - 179 NGL View in InterPro
N 1 - 179 NGL View in InterPro
5VFR n 1 - 179 NGL View in InterPro
N 1 - 179 NGL View in InterPro
5VFS n 1 - 179 NGL View in InterPro
N 1 - 179 NGL View in InterPro
5VFT n 1 - 179 NGL View in InterPro
N 1 - 179 NGL View in InterPro
5VFU n 1 - 179 NGL View in InterPro
N 1 - 179 NGL View in InterPro
6KWY b 1 - 179 NGL View in InterPro
N 1 - 179 NGL View in InterPro
6MSB n 1 - 179 NGL View in InterPro
N 1 - 179 NGL View in InterPro
6MSD n 1 - 179 NGL View in InterPro
N 1 - 179 NGL View in InterPro
6MSE n 1 - 179 NGL View in InterPro
N 1 - 179 NGL View in InterPro
6MSG n 1 - 179 NGL View in InterPro
N 1 - 179 NGL View in InterPro
6MSH n 1 - 179 NGL View in InterPro
N 1 - 179 NGL View in InterPro
6MSJ n 1 - 179 NGL View in InterPro
N 1 - 179 NGL View in InterPro
6MSK n 1 - 179 NGL View in InterPro
N 1 - 179 NGL View in InterPro
6R70 b 1 - 179 NGL View in InterPro
N 1 - 179 NGL View in InterPro
6REY H 1 - 179 NGL View in InterPro
V 1 - 179 NGL View in InterPro
6RGQ H 1 - 179 NGL View in InterPro
V 1 - 179 NGL View in InterPro
6WJD n 1 - 179 NGL View in InterPro
N 1 - 179 NGL View in InterPro
6WJN n 1 - 179 NGL View in InterPro
N 1 - 179 NGL View in InterPro
6XMJ H 1 - 179 NGL View in InterPro
36 - 213 5LF3 b 2 - 179 NGL View in InterPro
N 2 - 179 NGL View in InterPro
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TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.