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30  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: PSMD6_HUMAN (Q15008)

Summary

This is the summary of UniProt entry PSMD6_HUMAN (Q15008).

Description: 26S proteasome non-ATPase regulatory subunit 6
Source organism: Homo sapiens (Human) (NCBI taxonomy ID 9606)
Length: 389 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
disorder n/a 1 12
Pfam RPN7 66 239
coiled_coil n/a 67 101
low_complexity n/a 78 92
disorder n/a 81 83
disorder n/a 86 88
Pfam PCI 254 358

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q15008. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MPLENLEEEG LPKNPDLRIA QLRFLLSLPE HRGDAAVRDE LMAAVRDNNM
50
51
APYYEALCKS LDWQIDVDLL NKMKKANEDE LKRLDEELED AEKNLGESEI
100
101
RDAMMAKAEY LCRIGDKEGA LTAFRKTYDK TVALGHRLDI VFYLLRIGLF
150
151
YMDNDLITRN TEKAKSLIEE GGDWDRRNRL KVYQGLYCVA IRDFKQAAEL
200
201
FLDTVSTFTS YELMDYKTFV TYTVYVSMIA LERPDLREKV IKGAEILEVL
250
251
HSLPAVRQYL FSLYECRYSV FFQSLAVVEQ EMKKDWLFAP HYRYYVREMR
300
301
IHAYSQLLES YRSLTLGYMA EAFGVGVEFI DQELSRFIAA GRLHCKIDKV
350
351
NEIVETNRPD SKNWQYQETI KKGDLLLNRV QKLSRVINM            
389
 

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Checksums:
CRC64:8843E6684AE91ACD
MD5:8d2e46823d0558af5219c51b87e1bc14

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
PCI 254 - 358 5GJQ R 254 - 358 NGL View in InterPro
5GJR 5 254 - 358 NGL View in InterPro
R 254 - 358 NGL View in InterPro
5L4K R 254 - 358 NGL View in InterPro
5LN3 R 254 - 358 NGL View in InterPro
5M32 m 254 - 358 NGL View in InterPro
5T0C AY 254 - 358 NGL View in InterPro
BY 254 - 358 NGL View in InterPro
5T0G Y 254 - 358 NGL View in InterPro
5T0H Y 254 - 358 NGL View in InterPro
5T0I Y 254 - 358 NGL View in InterPro
5T0J Y 254 - 358 NGL View in InterPro
5VFP Y 254 - 358 NGL View in InterPro
5VFQ Y 254 - 358 NGL View in InterPro
5VFR Y 254 - 358 NGL View in InterPro
5VFS Y 254 - 358 NGL View in InterPro
5VFT Y 254 - 358 NGL View in InterPro
5VFU Y 254 - 358 NGL View in InterPro
5VGZ Y 254 - 358 NGL View in InterPro
5VHF Y 254 - 358 NGL View in InterPro
5VHH Y 254 - 358 NGL View in InterPro
5VHI Y 254 - 358 NGL View in InterPro
5VHS Y 254 - 358 NGL View in InterPro
6MSB Y 254 - 358 NGL View in InterPro
6MSD Y 254 - 358 NGL View in InterPro
6MSE Y 254 - 358 NGL View in InterPro
6MSG Y 254 - 358 NGL View in InterPro
6MSH Y 254 - 358 NGL View in InterPro
6MSJ Y 254 - 358 NGL View in InterPro
6MSK Y 254 - 358 NGL View in InterPro
6WJD Y 254 - 358 NGL View in InterPro
6WJN Y 254 - 358 NGL View in InterPro
RPN7 66 - 239 5GJQ R 66 - 239 NGL View in InterPro
5GJR 5 66 - 239 NGL View in InterPro
R 66 - 239 NGL View in InterPro
5L4K R 66 - 239 NGL View in InterPro
5LN3 R 66 - 239 NGL View in InterPro
5M32 m 66 - 239 NGL View in InterPro
5T0C AY 66 - 239 NGL View in InterPro
BY 66 - 239 NGL View in InterPro
5T0G Y 66 - 239 NGL View in InterPro
5T0H Y 66 - 239 NGL View in InterPro
5T0I Y 66 - 239 NGL View in InterPro
5T0J Y 66 - 239 NGL View in InterPro
5VFP Y 66 - 239 NGL View in InterPro
5VFQ Y 66 - 239 NGL View in InterPro
5VFR Y 66 - 239 NGL View in InterPro
5VFS Y 66 - 239 NGL View in InterPro
5VFT Y 66 - 239 NGL View in InterPro
5VFU Y 66 - 239 NGL View in InterPro
5VGZ Y 66 - 239 NGL View in InterPro
5VHF Y 66 - 239 NGL View in InterPro
5VHH Y 66 - 239 NGL View in InterPro
5VHI Y 66 - 239 NGL View in InterPro
5VHS Y 66 - 239 NGL View in InterPro
6MSB Y 66 - 239 NGL View in InterPro
6MSD Y 66 - 239 NGL View in InterPro
6MSE Y 66 - 239 NGL View in InterPro
6MSG Y 66 - 239 NGL View in InterPro
6MSH Y 66 - 239 NGL View in InterPro
6MSJ Y 66 - 239 NGL View in InterPro
6MSK Y 66 - 239 NGL View in InterPro
6WJD Y 66 - 239 NGL View in InterPro
6WJN Y 66 - 239 NGL View in InterPro
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TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.