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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: SBDS_CAEEL (Q23202)

Summary

This is the summary of UniProt entry SBDS_CAEEL (Q23202).

Description: Ribosome maturation protein SBDS
Source organism: Caenorhabditis elegans (NCBI taxonomy ID 6239)
Length: 253 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
disorder n/a 1 2
disorder n/a 4 5
Pfam SBDS 16 103
disorder n/a 100 104
Pfam SBDS_domain_II 111 172
disorder n/a 129 134
disorder n/a 150 151
Pfam SBDS_C 174 242

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q23202. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MSKNIKTPTN QKVLTNVAVV RMKKTGKRFE IACYKNKVVN WRNKSEKDID
50
51
EVLQTHTVFS NVSKGQLSKK EELIAAFGIE DQLEICKIIL DKGDLQVSEK
100
101
ERQAASDQSL KEVSQLIASM VVNPETKRPV PPSVIDKALQ EMHFSLKPNR
150
151
SSKQQALDAI PKLRETLKIE RAKMKIRVAI PTKEAKSVHT KLKTLFSDVE
200
201
VDDWQDGSLE MVGLIEPGSF RALDDLVRNE TKGHGRLEIL SLKDVVEGEL
250
251
QIS                                                   
253
 

Show the unformatted sequence.

Checksums:
CRC64:4C86D3CAFE5CB9FC
MD5:4fe9089b5103550c865278b3635fbd11

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;