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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: GDT12_ORYSJ (Q2R2Z4)

Summary

This is the summary of UniProt entry GDT12_ORYSJ (Q2R2Z4).

Description: GDT1-like protein 2, chloroplastic
Source organism: Oryza sativa subsp. japonica (Rice) (NCBI taxonomy ID 39947)
Length: 347 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
disorder n/a 9 10
disorder n/a 12 16
low_complexity n/a 62 77
disorder n/a 65 66
disorder n/a 72 94
transmembrane n/a 101 119
low_complexity n/a 103 114
transmembrane n/a 125 144
Pfam UPF0016 136 215
transmembrane n/a 165 189
transmembrane n/a 195 216
low_complexity n/a 235 248
low_complexity n/a 241 257
transmembrane n/a 257 274
Pfam UPF0016 265 339
transmembrane n/a 294 319
transmembrane n/a 326 346
low_complexity n/a 326 338
low_complexity n/a 332 347

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q2R2Z4. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MATAISVGVA VPAASRRRED GAGPPLLLRR RCLVEGQVRC RLPWLRPIRH
50
51
NVRVQTSNVN VGAGSYEGGE AGSHGEHLDS SATRDSNKPT KPPSGSRYPQ
100
101
SIAAVLLLCA LASAFIVFFK GQPSAVVAML AKSGFTAAFT LIFVSEIGDK
150
151
TFFIAALLAM QYQRALVLLG SMAALSLMTI VSVIIGRIFQ SVPAQFQTTL
200
201
PIGEYAAIAL LAFFGFKSIK DAWQLPDNAN GNLQGNSESG ELAEAEELVK
250
251
EKVAKKLTSP LEVLWKSFSL VFFAEWGDRS MLATIALGAA QSPFGVASGA
300
301
IAGHLVATFL AIVGGAFLAN YLSEKLVGLI GGVLFLLFAV ATFFGVF   
347
 

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Checksums:
CRC64:259B9B265101225F
MD5:7cbb5718939c322df985a6b0e8947484

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;