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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: CODA1_HUMAN (Q5TAT6)

Summary

This is the summary of UniProt entry CODA1_HUMAN (Q5TAT6).

Description: Collagen alpha-1(XIII) chain
Source organism: Homo sapiens (Human) (NCBI taxonomy ID 9606)
Length: 717 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
disorder n/a 1 18
disorder n/a 21 27
disorder n/a 31 33
low_complexity n/a 43 61
transmembrane n/a 45 63
coiled_coil n/a 65 85
disorder n/a 71 90
disorder n/a 98 228
low_complexity n/a 115 134
Pfam Collagen 156 216
low_complexity n/a 156 178
low_complexity n/a 178 193
low_complexity n/a 196 215
disorder n/a 233 234
disorder n/a 240 242
disorder n/a 246 717
Pfam Collagen 257 322
low_complexity n/a 270 309
Pfam Collagen 285 340
Pfam Collagen 318 383
low_complexity n/a 381 403
Pfam Collagen 382 441
low_complexity n/a 403 416
low_complexity n/a 427 441
Pfam Collagen 463 522
low_complexity n/a 464 483
low_complexity n/a 499 527
Pfam Collagen 506 567
low_complexity n/a 530 548
low_complexity n/a 562 589
Pfam Collagen 566 625
low_complexity n/a 619 643
Pfam Collagen 643 712
low_complexity n/a 649 673

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q5TAT6. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MVAERTHKAA ATGARGPGEL GAPGTVALVA ARAERGARLP SPGSCGLLTL
50
51
ALCSLALSLL AHFRTAELQA RVLRLEAERG EQQMETAILG RVNQLLDEKW
100
101
KLHSRRRREA PKTSPGCNCP PGPPGPTGRP GLPGDKGAIG MPGRVGSPGD
150
151
AGLSIIGPRG PPGQPGTRGF PGFPGPIGLD GKPGHPGPKG DMGLTGPPGQ
200
201
PGPQGQKGEK GQCGEYPHRE CLSSMPAALR SSQIIALKLL PLLNSVRLAP
250
251
PPVIKRRTFQ GEQSQASIQG PPGPPGPPGP SGPLGHPGLP GPMGPPGLPG
300
301
PPGPKGDPGI QGYHGRKGER GMPGMPGKHG AKGAPGIAVA GMKGEPGIPG
350
351
TKGEKGAEGS PGLPGLLGQK GEKGDAGNSI GGGRGEPGPP GLPGPPGPKG
400
401
EAGVDGQVGP PGQPGDKGER GAAGEQGPDG PKGSKGEPGK GEMVDYNGNI
450
451
NEALQEIRTL ALMGPPGLPG QIGPPGAPGI PGQKGEIGLP GPPGHDGEKG
500
501
PRGKPGDMGP PGPQGPPGKD GPPGVKGENG HPGSPGEKGE KGETGQAGSP
550
551
GEKGEAGEKG NPGAEVPGLP GPEGPPGPPG LQGVPGPKGE AGLDGAKGEK
600
601
GFQGEKGDRG PLGLPGASGL DGRPGPPGTP GPIGVPGPAG PKGERGSKGD
650
651
PGMTGPTGAA GLPGLHGPPG DKGNRGERGK KGSRGPKGDK GDQGAPGLDA
700
701
PCPLGEDGLP VQGCWNK                                    
717
 

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Checksums:
CRC64:FD12CA80CC93540F
MD5:2f463790c9d828a2a687beb9d701ff42

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.