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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: DNLI4_ORYSJ (Q7X7E9)

Summary

This is the summary of UniProt entry DNLI4_ORYSJ (Q7X7E9).

Description: Putative DNA ligase 4
Source organism: Oryza sativa subsp. japonica (Rice) (NCBI taxonomy ID 39947)
Length: 1322 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
sig_p n/a 1 18
Pfam DNA_ligase_A_N 6 201
low_complexity n/a 19 37
low_complexity n/a 95 107
Pfam DNA_ligase_A_M 241 431
low_complexity n/a 534 547
Pfam DNA_ligase_A_C 545 680
disorder n/a 606 608
Pfam BRCT_2 700 767
disorder n/a 705 709
Pfam DNA_ligase_IV 774 806
disorder n/a 928 1309
low_complexity n/a 941 950
low_complexity n/a 986 1002
low_complexity n/a 1050 1059
low_complexity n/a 1181 1190
low_complexity n/a 1261 1288

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q7X7E9. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MAATVRFGLL VAMFQAMSRD RTAAKKRARL RALLDRAYGP GGRDDYFSAL
50
51
RLVLPGLDRE RGSYGLKEAA LASVLVDALG IAKDSPDAVR LTNWRRGGGF
100
101
RNAGNFALVA AEVLQRRQGM TSGGLTIKEV NDALDRLAAT ENSVCLESEK
150
151
LLLILDRSEK ASILSSLIKK TNALEMKWLL MIILKDLKLG ISEKSVFHEF
200
201
HPDAEDLFNV TCDLRLVCEK LNDRSQRHKR QDIEVGKAVR PQLSMRVNNA
250
251
SSAWKKLHGK QVVAECKFDG DRIQIHKNGE EIHFFSRSFL DHSEYAPGMS
300
301
KVIIENILVD RCILDGEMLV WDTVLNRFAE FGSNQEIAKA AKEGLETDRQ
350
351
LCCILEWIAS YVLALCVNIL SCQDFFFSNK RESYVAFDIL YAGDTSVIHQ
400
401
SLTERHEILQ KVVRPLKGHL EILVPTGGLN IHRPPDEPCW SILAHSLDDV
450
451
EKFFKDTVDN RFFPTSPNTD ELSNLSISLM IQFRFSDYSI CYVLREEGII
500
501
LKDLESKWEP GDRSGKWLKL KPDYIHAGAD LDVIIIGGYY GSGRRGGEVA
550
551
QFLVGLAVPS DDNSYPKRFL SFCRVGTGLS DEELDALVTK LKPHFRKNEY
600
601
PKKPPRFYEV TNHSKERPDV WIESPDKQSV RFRKHLIYCI TKCRSVIISI
650
651
TSDIRTIKSE VFAAPYSLRF PRIQRLRYDK PWHECLDVQA FVDIVHSSNG
700
701
TTHRAADDDN DLKNVKNGGS FSMNLNDSVT HCIAAEKKAT RQGRIIHYSW
750
751
ILDCCKEKRL LHLQPKFDPC LQPMHKFPEE IDSYADYFYW DIDISDLKQI
800
801
FSNMDRAVVD SNMVHHYKKK YCADERFCFF QGCCVYFYHA PLVNADYNVI
850
851
SDLALKRVKQ DLTMHGGQVC SILAPATHLI IVSVLQAYNF DMLYKSLPPA
900
901
ERRYLHDKRL QVVSNKWLED SVEKQTRLPE TTYSLKPDTL EEIEIERSEE
950
951
TVQPCNDKLE ENEKADTSHV KHAPRKRGRP SSSASRTAKP APRPVRRTRA
1000
1001
RRGNQHAKID DVEPEESDHG ETGLDDQIPD TDNISKMEVD SFDKDQVSAR
1050
1051
PVRRTRARRG KQHAKIDYGQ SEESDPGETG QDDQRLDADY ISKMEEDSSD
1100
1101
RDQGAHPTAP RVVRRSRAQR GKWLAKIDRE TGPGETGQDD KKLNADSISK
1150
1151
MEEHAHDKDQ EPPPGAQLIT LDEQEPKGIK SSTTETPSSP KHERNQTVLR
1200
1201
RDTAETTSSA TCEKMEQMVD PLHAMLLDMI PSLGQMKTDV GNRVAEAKAE
1250
1251
TNPPWVGSST SSYVAPVPQA SASSASSSGV PAPHAGSSTQ STGVPAPDPT
1300
1301
AGAPKKKKVS YKDVAGALLK DW                              
1322
 

Show the unformatted sequence.

Checksums:
CRC64:110BF7B94DB62A67
MD5:3ab214c95dcbaa6a2550ed5281bc23f6

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;