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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: DCL3B_ORYSJ (Q7XD96)

Summary

This is the summary of UniProt entry DCL3B_ORYSJ (Q7XD96).

Description: Endoribonuclease Dicer homolog 3b EC=3.1.26.-
Source organism: Oryza sativa subsp. japonica (Rice) (NCBI taxonomy ID 39947)
Length: 1637 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
disorder n/a 1 44
low_complexity n/a 9 28
Pfam DEAD 41 204
Pfam Helicase_C 393 515
Pfam Dicer_dimer 581 668
low_complexity n/a 632 645
disorder n/a 675 678
disorder n/a 684 685
low_complexity n/a 768 784
Pfam PAZ 887 1028
Pfam Ribonuclease_3 1065 1200
transmembrane n/a 1190 1211
low_complexity n/a 1190 1205
Pfam Ribonuclease_3 1277 1389
coiled_coil n/a 1462 1482
low_complexity n/a 1464 1472
disorder n/a 1605 1609

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q7XD96. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MADDEAAVLP PPPPLPPPCR PHRQLRPRGS RPTADTTPRT SQLVEVFEAA
50
51
LRGNTIAVLD TGSGKTMVAV MLAREHARRV RAGEAPRRIV VFLAPTVHLV
100
101
HQQFEVIREY TDLDVMMCSG ASRVGEWGAD HWKEEVGRNE IVVMTPQILL
150
151
DALRHAFLTM SAVSLLIFDE CHRACGSHPY ARIMKEFYFG SQWRPDVFGM
200
201
TASPVATKGA STLHNCEAHI SQLELTLDAK IYIVEDRNEL ESFSPPTTIV
250
251
NKYYDAYMVD FDNLKSKLQI FSDEFDSLLV GLQESPSNKF KDTDNILETS
300
301
RKSLSRYHGK ILYSLNDLGP IITSEVVKIH IESVKPLCDS EDCIFSKASL
350
351
CLHMSYFKEA LSLIEEILPQ GYGELMKSES GSEELTKRGY ISSKVNTLIN
400
401
IFKSFGSSNE VLCLIFVDRI ITAKAVERFM RGIVNFSCFS ISYLTGGSTS
450
451
KDALSPAVQR FTLDLFRAGK VNLLFTTDVT EEGVDVPNCS CVIRFDLPRT
500
501
VCSYVQSRGR ARRNNSEFIL MIERGNLQQQ EHIFRMIQTG YYVKNCALYR
550
551
HPNALSYDLS IQGMYTYQVQ STGATITADC CVNLIRKYCE KLPKDRYFMP
600
601
KPSFEVTIED GLFKCTLTLP RNAAFQSIVG PLSSSSNLSK QLVSLEACKK
650
651
LHQLGELNDH LVPLTEEPMD TDFTTADEKC ISGPGTTKRK ELHGTTCVLA
700
701
LSGTWIHDSE NITLNTYRID FLCDQEGENY AGFVLLMEPE LDDDVAPSKM
750
751
DLFLIPNKMV YTTVTPRGKV QLNKKQLGKG KLFQEFFFNG IFGRLFHGSR
800
801
KSGAQRDFIF KKGHEIQWNT ESMYLLLPLR DSSYIQDDLS IHWEAIESCA
850
851
GAVEQLWSSY QGDENVIPVN CIPQKRRGGQ EEIIHLANKS LHCSSIKDSV
900
901
VLSLHTGRIY TVLDLILDTT AEDSFDEMCK GKASPFTSFV DYYHQKYGII
950
951
IQHPEQPLLL LKQSHNAHNL LFSKLKYLDG STGKPLLMEK EQIHARVPPE
1000
1001
LLIHLDVTTD ILKSFYLLPS VIHRLQSLML ASQLRREIGY NQHIPVTLIL
1050
1051
EAITTLRCCE TFSLERLELL GDSVLKYVVG CDLFLRYPMK HEGQLSDMRS
1100
1101
KAVCNATLHK HGIWRSLQGY VRDNAFDPRR WVAPGQISLR PFPCNCGIET
1150
1151
AFVPSHRRYI RDDPSFFVGK PCDRGHRWMC SKTISDCVEA LVGAYYVGGG
1200
1201
IAAALWVMRW FGIDIKCDMK LLQEVKFNAS HLCSLSKIND IEELEAKLKY
1250
1251
NFSVKGLLLE AITHPSLQEL GVDYCYQRLE FLGDSVLDLL LTRHLYATHT
1300
1301
DVDPGELTDL RSALVSNENF AQAVVRNNIH SHLQHGSGIL LEQITEYVRS
1350
1351
NLECQGKESE FLQHTTCKVP KVLGDIMESI AGAVFIDTDF NVDMVWEIFE
1400
1401
PLLSPLITPD KLALPPYREL LELCSHIGCF LNSKCTSKGE EVIIEMSLQL
1450
1451
RDELLVAQGH DRNKKRAKAK AASRILADLK QQGLSIKQCL SKAKQLDIVT
1500
1501
SDLQFDLTSS GTQLSYSDLN DYHILEGLSS VKKEVVLPLK MEKGGPRSAL
1550
1551
FKLCKILQWP MPEFEFVEQR FRTPIVMDGA TTTNFNSFVS TITLHIPDAT
1600
1601
TITFQGERRT DKKSAQDSAS LMMLHKLQEL KICICKT              
1637
 

Show the unformatted sequence.

Checksums:
CRC64:811F2AB02659B318
MD5:f1bbe6a30f0a33aa42cb2908f51a5541

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;