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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: ZGPAT_MOUSE (Q8VDM1)

Summary

This is the summary of UniProt entry ZGPAT_MOUSE (Q8VDM1).

Description: Zinc finger CCCH-type with G patch domain-containing protein
Source organism: Mus musculus (Mouse) (NCBI taxonomy ID 10090)
Length: 511 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
disorder n/a 1 12
coiled_coil n/a 3 23
disorder n/a 33 35
disorder n/a 39 42
low_complexity n/a 53 64
disorder n/a 64 69
disorder n/a 73 74
disorder n/a 90 129
low_complexity n/a 116 128
Pfam zf-CCCH_4 177 198
disorder n/a 265 266
disorder n/a 268 294
low_complexity n/a 270 287
Pfam G-patch 313 356
disorder n/a 333 334
disorder n/a 339 345
disorder n/a 357 444
low_complexity n/a 379 392
coiled_coil n/a 432 459
disorder n/a 446 511
coiled_coil n/a 471 508

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q8VDM1. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MDEDNLETAL QTYRAQLQQV ELALGAGLDA SEQADLRQLQ GDLKELIELT
50
51
EASLLSVRKS KLLSTVDQES PAQEDAEYLA FQKAIAEEVE APGAPCNDSE
100
101
TAPGSEVQPG STSSALEEEE EDPDLEELSG AKVNAPYYSA WGTLEYHNAM
150
151
VVGAEEAEDG SACVRVLYLY PTHKSLKPCP FFLEGKCRFK ENCRFSHGQV
200
201
VSVDELRPFQ DPDLSLLQTG SACLAKHQDG LWHPARITDV DNGYYTVKFD
250
251
SLLLKEAVVE GDSILPPLRT EATESSDSDT GDASDSSYAR VVEPSTVDTG
300
301
TCSSAFAGWE VHTRGIGSKL LVKMGYEFGK GLGRHAEGRV EPIHAVVLPR
350
351
GKSLDQCAEI LQKKTKRGQA GSNRPPKCRR SGSRPEGRPP PRNVFDFLNE
400
401
KLQSQVPGTP DAGVDTPERR NKDMYHASKS AKQALSLQLF QTEEKIERTQ
450
451
RDIRGIQEAL TRNTGRHNMT TAHLQEKLEG AQRQLGQLRA QEADLQRKQR
500
501
KADTHRKMTE F                                          
511
 

Show the unformatted sequence.

Checksums:
CRC64:13B7C46AB107F918
MD5:31bfdf98f4761cfa787b05877553e578

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;