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16  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RM34_HUMAN (Q9BQ48)

Summary

This is the summary of UniProt entry RM34_HUMAN (Q9BQ48).

Description: 39S ribosomal protein L34, mitochondrial
Source organism: Homo sapiens (Human) (NCBI taxonomy ID 9606)
Length: 92 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

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Source Domain Start End
sig_p n/a 1 15
disorder n/a 40 66
Pfam Ribosomal_L34 49 92
disorder n/a 91 92

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q9BQ48. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MAVLAGSLLG PTSRSAALLG GRWLQPRAWL GFPDAWGLPT PQQARGKARG
50
51
NEYQPSNIKR KNKHGWVRRL STPAGVQVIL RRMLKGRKSL SH        
92
 

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Checksums:
CRC64:923C87BAFA01054C
MD5:afaa1200462e945eeae01f664b0a0ff3

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe SIFTS project, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Ribosomal_L34 49 - 92 3J9M 2 49 - 92 Show 3D Structure View in InterPro
5OOL 2 49 - 92 Show 3D Structure View in InterPro
6I9R 2 49 - 92 Show 3D Structure View in InterPro
6NU2 2 49 - 92 Show 3D Structure View in InterPro
6NU3 2 49 - 92 Show 3D Structure View in InterPro
6VLZ 2 49 - 92 Show 3D Structure View in InterPro
6VMI 2 49 - 92 Show 3D Structure View in InterPro
6ZS9 2 49 - 92 Show 3D Structure View in InterPro
6ZSA 2 49 - 92 Show 3D Structure View in InterPro
6ZSB 2 49 - 92 Show 3D Structure View in InterPro
6ZSC 2 49 - 92 Show 3D Structure View in InterPro
6ZSD 2 49 - 92 Show 3D Structure View in InterPro
6ZSE 2 49 - 92 Show 3D Structure View in InterPro
6ZSG 2 49 - 92 Show 3D Structure View in InterPro
50 - 92 3J7Y 2 50 - 92 Show 3D Structure View in InterPro
5OOM 2 50 - 92 Show 3D Structure View in InterPro
×

The parts of the structure corresponding to the Pfam family are highlighted in blue.

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TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;