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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: Q9ET50_RAT (Q9ET50)

Summary

This is the summary of UniProt entry Q9ET50_RAT (Q9ET50).

Description: Staufen isoform Stau+I6 {ECO:0000313|EMBL:AAF98119.1}
Source organism: Rattus norvegicus (Rat) (NCBI taxonomy ID 10116)
Length: 495 amino acids
Reference Proteome: ✓

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Download the data used to generate the domain graphic in JSON format.

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Source Domain Start End
disorder n/a 1 5
disorder n/a 10 17
low_complexity n/a 24 39
disorder n/a 50 92
Pfam dsrm 98 167
disorder n/a 117 123
disorder n/a 125 131
disorder n/a 134 138
low_complexity n/a 138 153
low_complexity n/a 145 157
disorder n/a 146 152
disorder n/a 154 158
disorder n/a 160 161
disorder n/a 165 167
disorder n/a 174 200
disorder n/a 202 214
Pfam dsrm 205 270
disorder n/a 217 229
disorder n/a 235 260
disorder n/a 268 272
disorder n/a 274 327
disorder n/a 342 365
Pfam Staufen_C 364 475
disorder n/a 389 408
disorder n/a 476 487

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q9ET50. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MYKPVDPHSR MQSTYSYGMR GGAYPPRYFY PFPVPPLLYQ VELSVGGQQF
50
51
NGKGKMRPPV KHDATARALR TLQSEPLPER LEVNGRESEE ENLNKSEISQ
100
101
VFEIALKRNL PVNFESFPLT QVARESGPPH MKNFVTRVSV GEFVGEGEGK
150
151
SKKISKKNAA RAVLEQLRRL PPLPAVERVK PRIKKKSQPT CKLQTAPDYG
200
201
QGMNPISRLA QIQQAKKEKE PEYMLLTERG LPRRREFVMQ VKVGHHTAEG
250
251
AGTNKKVAKR NAAENMLEIL GFKVPQAQPA KPALKSEEKT PVKKPGDGRK
300
301
VTFFEPSPGD ENGTSNKEDE FRMPYLSHQQ LPAGILPMVP EVAQAVGVSQ
350
351
GHHTKDFARA APNPAKATVT AMIARELLYG GTSPTAETIL KSNISSGHVP
400
401
HGPRTRPSEQ LYYLSRAQGF QVEYKDFPKN NKNECVSLIN CSSQPPLVSH
450
451
GIGKDVESCH DMAALNILKL LSELDQQSTE MPRTGNGPVS ACGRC     
495
 

Show the unformatted sequence.

Checksums:
CRC64:E9F253BEC4110095
MD5:7dcfaccb98530726941d8b21a5a2dfd2

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.

AlphaFold Structure Prediction

The protein structure below has been predicted by DeepMind with AlphaFold. For more information, please visit the AlphaFold page for this protein.

Model confidence scale

  Very High (pLDDT > 90)
  Confident (90 > pLDDT > 70)
  Low (70 > pLDDT > 50)
  Very Low (pLDDT < 50)
Highly accurate protein structure prediction with AlphaFold. John Jumper, Richard Evans, Alexander Pritzel, Tim Green, Michael Figurnov, Olaf Ronneberger, Kathryn Tunyasuvunakool, Russ Bates, Augustin Žídek, Anna Potapenko, Alex Bridgland, Clemens Meyer, Simon A. A. Kohl, Andrew J. Ballard, Andrew Cowie, Bernardino Romera-Paredes, Stanislav Nikolov, Rishub Jain, Jonas Adler, Trevor Back, Stig Petersen, David Reiman, Ellen Clancy, Michal Zielinski, Martin Steinegger, Michalina Pacholska, Tamas Berghammer, Sebastian Bodenstein, David Silver, Oriol Vinyals, Andrew W. Senior, Koray Kavukcuoglu, Pushmeet Kohli & Demis Hassabis Nature 2021-07-15; DOI: 10.1038/s41586-021-03819-2;