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Structure: 5MG3


PDB entry 5mg3: EM fitted model of bacterial holo-translocon
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PDB entry 5mg3

Em fitted model of bacterial holo-translocon

Experiment type: Electron Microscopy, resolution 14.00Å
Release date: 2017-08-02
Authors: Schaffitzel, C., Botte, M.
Species: Escherichia coli (strain K12)


Below is the PDBprint for entry 5mg3.

External database links

Domain organisation

Many structures in the PDB are linked to one or more UniProt protein sequence entries. This section shows the Pfam domains which are found on the UniProt sequence(s) referred to by this structure.

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Sequence mapping

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from PDBe, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the sequences and Pfam domains that correspond to this structure.

PDB UniProt Pfam family
Chain Start End ID Start End
C 60 343 P25714 60 343 YidC_periplas (PF14849)
C 354 532 P25714 354 532 60KD_IMP (PF02096)
D 2 27 P0AG90 2 27 SecD-TM1 (PF13721)
D 426 606 P0AG90 426 606 SecD_SecF (PF02355)
E 450 504 P0AG96 69 123 SecE (PF00584)
F 39 66 P0AG93 39 66 Sec_GG (PF07549)
F 114 302 P0AG93 114 302 SecD_SecF (PF02355)
G 509 537 P0AG99 45 73 SecG (PF03840)
Y 76 417 P0AGA2 76 417 SecY (PF00344)

Note: This mapping was provided by the PDBe group.

View structure

View Pfam families and other data mapped to the structure of PDB entry 5mg3 in InterPro